Factsheet for TraesCS6B01G261000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G232300.1	Wheat	cytosol	96.11	96.11
TraesCS6B01G260700.2	Wheat	cytosol	95.56	94.51
Os02t0635200-01	Rice	plasma membrane	90.83	90.33
EES05474	Sorghum	cytosol	90.28	90.03
Zm00001d051214_P001	Maize	cytosol	89.44	89.2
GSMUA_Achr8P13970_001	Banana	plastid	75.56	78.39
TraesCS6B01G260800.2	Wheat	cytosol	73.33	77.42
VIT_06s0080g00950.t01	Wine grape	cytosol	23.61	70.25
CDY35679	Canola	cytosol	67.78	68.54
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	67.22	68.17
CDY09130	Canola	cytosol	67.5	68.07
Bra020184.1-P	Field mustard	cytosol	66.94	67.51

Protein Annotations

Gene3D:3.60.110.10	MapMan:9.5.2.5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	InterPro:IPR003010
InterPro:IPR036526	InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795	ScanProsite:PS00920	ScanProsite:PS00921	PFscan:PS50263
PANTHER:PTHR23088	PANTHER:PTHR23088:SF31	SUPFAM:SSF56317	EnsemblPlantsGene:TraesCS6B01G261000	EnsemblPlants:TraesCS6B01G261000.1	TIGR:cd07564

Description

No Description!

Coordinates

chr6B:-:470992600..471001625

Molecular Weight (calculated)

38394.0 Da

IEP (calculated)

5.440

GRAVY (calculated)

-0.008

Length

360 amino acids

Sequence
(BLAST)

001: MALAPSGSGS TPVIAEVEMN GGADQSATTV RATVVQASTV FYDTPATLDK AERLIAEAAG YGSQLVVFPE AFVGGYPRGS TFGFGISISM TNPQDKGKGE
101: FQKYHATAID VPGPEVTRLA AMAGKYKVFL VMGVIEREGY TLYCSVLFFD PLGRYLGKHR KLMPTALERI IWGFGDGSTI PVYDTPLGKI GALICWENKM
201: PLLRTALYGR GIEIYCAPTA DSRPVWQASM THIALEGGCF VLSANQFCRR KDYPPPSEYA FAGLGEEPSP ETVVCPGGSV IISPSGEVLA GPNYDGEALI
301: TADLDMGKIV RAKFGFDVVG HYARPEVLSL VVDDQPHRPV SFTSAAEKTP AAKSDGTAKP

Best Arabidopsis Sequence Match ( AT5G22300.1 )
(BLAST)

001: MSMQQETSHM TAAPQTNGHQ IFPEIDMSAG DSSSIVRATV VQASTVFYDT PATLDKAERL LSEAAENGSQ LVVFPEAFIG GYPRGSTFEL AIGSRTAKGR
101: DDFRKYHASA IDVPGPEVER LALMAKKYKV YLVMGVIERE GYTLYCTVLF FDSQGLFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADSRETWLA SMTHIALEGG CFVLSANQFC RRKDYPSPPE YMFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYRGEA
301: LITADLDLGD IARAKFDFDV VGHYSRPEVF SLNIREHPRK AVSFKTSKVM EDESV

Arabidopsis Description

NIT4Bifunctional nitrilase/nitrile hydratase NIT4 [Source:UniProtKB/Swiss-Prot;Acc:P46011]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.