Factsheet for TraesCS6B01G260700.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G215400.2	Wheat	cytosol	98.35	98.35
TraesCS6A01G232500.1	Wheat	cytosol	98.08	98.08
TraesCS6B01G261000.1	Wheat	cytosol	94.51	95.56
EES05474	Sorghum	cytosol	90.38	91.14
Os02t0635200-01	Rice	plasma membrane	90.38	90.88
Zm00001d051214_P001	Maize	cytosol	89.29	90.03
GSMUA_Achr8P13970_001	Banana	plastid	75.27	78.96
TraesCS6B01G260800.2	Wheat	cytosol	72.25	77.13
HORVU6Hr1G059730.3	Barley	plastid	94.23	76.39
VIT_06s0080g00950.t01	Wine grape	cytosol	23.9	71.9
CDY35679	Canola	cytosol	67.86	69.38
CDY09130	Canola	cytosol	67.31	68.63
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	66.48	68.17
Bra020184.1-P	Field mustard	cytosol	66.76	68.07

Protein Annotations

Gene3D:3.60.110.10	MapMan:9.5.2.5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	InterPro:IPR003010
InterPro:IPR036526	InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795	ScanProsite:PS00920	ScanProsite:PS00921	PFscan:PS50263
PANTHER:PTHR23088	PANTHER:PTHR23088:SF31	SUPFAM:SSF56317	EnsemblPlantsGene:TraesCS6B01G260700	EnsemblPlants:TraesCS6B01G260700.2	TIGR:cd07564

Description

No Description!

Coordinates

chr6B:-:470913623..470917122

Molecular Weight (calculated)

38831.4 Da

IEP (calculated)

4.642

GRAVY (calculated)

0.009

Length

364 amino acids

Sequence
(BLAST)

001: MALVPSGSGS APVIAEVEMN GGADQSATTV RATVVQASTV FYDTPATLDK AERLIAEAAG YGSQLVVFPE AFVGGYPRGS TFGFGISISI TNPKDKGKGE
101: FQKYYAAAID VPEQPAGPEV TLLAAMAGKY KVFLVMGVIE REGYTLYCSV LFFDPLGRYL GKHRKLMPTA LERIIWGFGD GSTIPVYDTP LGKIGALICW
201: ENKMPLLRTA LYGKGIEIYC APTADSRPVW QASMTHIAME GGCFVLSANQ FCRRQDYPPP SEYAFAGLGE EPSPDTVVCP GGSVIISPSG EVLAGPNYDG
301: EALITADLDM GEIVRAKFDF DVVGHYSRPE VLSLVVDDQP HRPVSFTSAA EKAPAAKSDD TAKP

Best Arabidopsis Sequence Match ( AT3G44310.3 )
(BLAST)

001: MSSTKDMSTV QNATPFNGVA PSTTVRVTIV QSSTVYNDTP ATIDKAEKYI VEAASKGAEL VLFPEGFIGG YPRGFRFGLA VGVHNEEGRD EFRKYHASAI
101: HVPGPEVARL ADVARKNHVY LVMGAIEKEG YTLYCTVLFF SPQGQFLGKH RKLMPTSLER CIWGQGDGST IPVYDTPIGK LGAAICWENR MPLYRTALYA
201: KGIELYCAPT ADGSKEWQSS MLHIAIEGGC FVLSACQFCQ RKHFPDHPDY LFTDWYDDKE HDSIVSQGGS VIISPLGQVL AGPNFESEGL VTADIDLGDI
301: ARAKLYFDSV GHYSRPDVLH LTVNEHPRKS VTFVTKVEKA EDDSNK

Arabidopsis Description

NIT1Uncharacterized protein At3g44310 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVD5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.