Factsheet for TraesCS6B01G260800.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G215300.1	Wheat	cytosol	97.95	97.95
HORVU6Hr1G059740.1	Barley	cytosol	97.36	97.36
TraesCS6A01G232400.2	Wheat	cytosol	87.1	86.34
HORVU6Hr1G059760.1	Barley	cytosol	84.16	85.93
EES05473	Sorghum	cytosol	86.51	84.77
Os02t0635000-01	Rice	cytosol	87.1	83.19
KXG30695	Sorghum	cytosol	82.99	77.96
GSMUA_Achr8P13970_001	Banana	plastid	76.25	74.93
TraesCS6B01G261000.1	Wheat	cytosol	77.42	73.33
TraesCS6B01G260700.2	Wheat	cytosol	77.13	72.25
Zm00001d017352_P001	Maize	cytosol	84.16	71.93
VIT_06s0080g00950.t01	Wine grape	cytosol	24.63	69.42
CDY35679	Canola	cytosol	71.26	68.26
CDY09130	Canola	cytosol	71.26	68.07
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	70.38	67.61
Bra020184.1-P	Field mustard	cytosol	70.67	67.51

Protein Annotations

Gene3D:3.60.110.10	MapMan:9.5.2.5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	InterPro:IPR003010
InterPro:IPR036526	InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795	ScanProsite:PS00920	ScanProsite:PS00921	PFscan:PS50263
PANTHER:PTHR23088	PANTHER:PTHR23088:SF31	SUPFAM:SSF56317	EnsemblPlantsGene:TraesCS6B01G260800	EnsemblPlants:TraesCS6B01G260800.2	TIGR:cd07564

Description

No Description!

Coordinates

chr6B:-:470918657..470921934

Molecular Weight (calculated)

36335.6 Da

IEP (calculated)

5.913

GRAVY (calculated)

0.086

Length

341 amino acids

Sequence
(BLAST)

001: MALSPASVGP VIAEVEMNAG ADQGATTVRA TVVQACSVFY DTPATLDKAE KLIVEAAGYG SQLVLFPEVF VGGYPHGSTF GLTIGSRSAK GKEDFRKYHA
101: AAIDVPGPEV SRLAALAGKY KVFLVIGVVE RAGYTLYNTV LSFDSLGKYL GKHRKLMPTA LERVFWGFGD GSTIPVYDTP LGKIGAVICW ENRMPLIRTA
201: MYAKGVQIYC APTADALPSW QASMTHIALE GGCFVLTANQ FCRRKDFPPP PEYTFGGHEE EPSPETAVCP GGSAIISPSG TVLAGPNYEG EALLTADLDL
301: GEIVRAKFDF DVVGHYARPE VLSLTVKTEP KHAVSFTSTV G

Best Arabidopsis Sequence Match ( AT5G22300.1 )
(BLAST)

001: MSMQQETSHM TAAPQTNGHQ IFPEIDMSAG DSSSIVRATV VQASTVFYDT PATLDKAERL LSEAAENGSQ LVVFPEAFIG GYPRGSTFEL AIGSRTAKGR
101: DDFRKYHASA IDVPGPEVER LALMAKKYKV YLVMGVIERE GYTLYCTVLF FDSQGLFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADSRETWLA SMTHIALEGG CFVLSANQFC RRKDYPSPPE YMFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYRGEA
301: LITADLDLGD IARAKFDFDV VGHYSRPEVF SLNIREHPRK AVSFKTSKVM EDESV

Arabidopsis Description

NIT4Bifunctional nitrilase/nitrile hydratase NIT4 [Source:UniProtKB/Swiss-Prot;Acc:P46011]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.