CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G260800.2	Wheat	cytosol	77.96	82.99
HORVU6Hr1G059740.1	Barley	cytosol	77.69	82.7
EES05473	Sorghum	cytosol	79.06	82.47
TraesCS6D01G215300.1	Wheat	cytosol	76.86	81.82
Os02t0635000-01	Rice	cytosol	78.51	79.83
HORVU6Hr1G059760.1	Barley	cytosol	68.04	73.95
GSMUA_Achr8P13970_001	Banana	plastid	70.52	73.78
EES05474	Sorghum	cytosol	73.28	73.68
TraesCS6A01G232400.2	Wheat	cytosol	69.15	72.97
VIT_06s0080g00950.t01	Wine grape	cytosol	23.69	71.07
CDY09130	Canola	cytosol	67.49	68.63
CDY35679	Canola	cytosol	67.22	68.54
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	66.94	68.45
Bra020184.1-P	Field mustard	cytosol	66.94	68.07
EES12535	Sorghum	cytosol	61.16	64.91

Protein Annotations

Gene3D:3.60.110.10	MapMan:9.5.2.5	UniProt:A0A194YS86	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810
InterPro:IPR003010	InterPro:IPR036526	EnsemblPlants:KXG30695	ProteinID:KXG30695	ProteinID:KXG30695.1	InterPro:Nitrilase/CN_hydratase_CS
PFAM:PF00795	ScanProsite:PS00920	ScanProsite:PS00921	PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF31
EnsemblPlantsGene:SORBI_3004G225100	SUPFAM:SSF56317	UniParc:UPI0001C80CC3	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:57540808..57544914

Molecular Weight (calculated)

38501.8 Da

IEP (calculated)

5.739

GRAVY (calculated)

-0.049

Length

363 amino acids

Sequence
(BLAST)

001: MALAPASSGK EPVISPPEVE MNGGADQPAA TTVRASVVQA SSVFYDTPAT LDKAEKFIAE AAGNGSQLVL FPEAFIGGYP HGSTFGLAIG NRTAKGKEDF
101: QKYHAAAIDV PGPEVSRLAS LAGKYKVFLV MGVVERAGYT LYNTALFFDP LGKFLGKHRK LVPTALERTF WGFGDGSTLP VFDTPLGKIG ALLCWENKMP
201: LARTAMYAKG IQIYCAPTAD ASPTWVASMT HIALEGGCFV VSANQFCRRK DYPPPPEYTF GGLDEEPSPE TVVCPGGSVI VSPSGTVLAG PNFEGEGLVT
301: ADLDLGEIVR AKFDFDVVGH YSRREVLSLV VKTDPKSAVS FTASADGERP ASAGKKRDDS VYK

Best Arabidopsis Sequence Match ( AT5G22300.1 )
(BLAST)

001: MSMQQETSHM TAAPQTNGHQ IFPEIDMSAG DSSSIVRATV VQASTVFYDT PATLDKAERL LSEAAENGSQ LVVFPEAFIG GYPRGSTFEL AIGSRTAKGR
101: DDFRKYHASA IDVPGPEVER LALMAKKYKV YLVMGVIERE GYTLYCTVLF FDSQGLFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADSRETWLA SMTHIALEGG CFVLSANQFC RRKDYPSPPE YMFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYRGEA
301: LITADLDLGD IARAKFDFDV VGHYSRPEVF SLNIREHPRK AVSFKTSKVM EDESV

Arabidopsis Description

NIT4Bifunctional nitrilase/nitrile hydratase NIT4 [Source:UniProtKB/Swiss-Prot;Acc:P46011]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.