Factsheet for GSMUA_Achr8P13970_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
plastid 5
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0635200-01	Rice	plasma membrane	81.56	78.18
EES05474	Sorghum	cytosol	80.69	77.56
TraesCS6B01G260800.2	Wheat	cytosol	74.93	76.25
HORVU6Hr1G059740.1	Barley	cytosol	74.93	76.25
Zm00001d051214_P001	Maize	cytosol	79.25	76.18
TraesCS6A01G232300.1	Wheat	cytosol	78.67	75.83
TraesCS6A01G232500.1	Wheat	cytosol	79.54	75.82
TraesCS6B01G261000.1	Wheat	cytosol	78.39	75.56
TraesCS6D01G215400.2	Wheat	cytosol	79.25	75.55
TraesCS6D01G215300.1	Wheat	cytosol	74.06	75.37
TraesCS6B01G260700.2	Wheat	cytosol	78.96	75.27
EES05473	Sorghum	cytosol	73.2	72.99
Os02t0635000-01	Rice	cytosol	74.64	72.55
CDY09130	Canola	cytosol	74.06	71.99
CDY35679	Canola	cytosol	73.78	71.91
VIT_06s0080g00950.t01	Wine grape	cytosol	25.07	71.9
Bra020184.1-P	Field mustard	cytosol	73.78	71.71
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	72.91	71.27
KXG30695	Sorghum	cytosol	73.78	70.52
HORVU6Hr1G059760.1	Barley	cytosol	64.84	67.37
TraesCS6A01G232400.2	Wheat	cytosol	66.28	66.86
Zm00001d017352_P001	Maize	cytosol	73.78	64.16
EES12535	Sorghum	cytosol	62.54	63.45
HORVU6Hr1G059730.3	Barley	plastid	78.1	60.36

Protein Annotations

Gene3D:3.60.110.10	MapMan:9.5.2.5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	EnsemblPlantsGene:GSMUA_Achr8G13970_001
EnsemblPlants:GSMUA_Achr8P13970_001	EnsemblPlants:GSMUA_Achr8T13970_001	InterPro:IPR003010	InterPro:IPR036526	UniProt:M0TQA0	InterPro:Nitrilase/CN_hydratase_CS
PFAM:PF00795	ScanProsite:PS00920	ScanProsite:PS00921	PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF31
SUPFAM:SSF56317	UniParc:UPI000295FCB3	:	:	:	:

Description

Bifunctional nitrilase/nitrile hydratase NIT4A [Source:GMGC_GENE;Acc:GSMUA_Achr8G13970_001]

Coordinates

chr8:-:10638518..10642463

Molecular Weight (calculated)

37275.6 Da

IEP (calculated)

4.862

GRAVY (calculated)

0.055

Length

347 amino acids

Sequence
(BLAST)

001: MALVPSSAVG SPLIAEVDMG GSDPSSTVRA TVVQASTVFY DTPATLDKAE RLVAEAASYG SQLVVFPEAF IGGYPRGSTY GVTIGSRSAK GQEEFRKYHA
101: AAIDVPGPEV DRLAALAGKY KIFLVMGVIE RAGYTLYCTV LFFDPQGQYL GKHRKLMPTA LERIIWGFGD GSTIPVFETP MGKIGALICW ENRMPLLRTA
201: LYGKGVEIYC APTADARDVW QASMVHIALE GGCFVLSANQ FCRRKDYPPP PDYVFAGAEE EPSMDSVVCA GGSVIVSPSG AVLAGPNYEG EALISADLDL
301: GEIVRAKFVF DVVGHYSRPE VLSLTVKEDP HYPVSFTSAE KTESTQK

Best Arabidopsis Sequence Match ( AT5G22300.1 )
(BLAST)

001: MSMQQETSHM TAAPQTNGHQ IFPEIDMSAG DSSSIVRATV VQASTVFYDT PATLDKAERL LSEAAENGSQ LVVFPEAFIG GYPRGSTFEL AIGSRTAKGR
101: DDFRKYHASA IDVPGPEVER LALMAKKYKV YLVMGVIERE GYTLYCTVLF FDSQGLFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADSRETWLA SMTHIALEGG CFVLSANQFC RRKDYPSPPE YMFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYRGEA
301: LITADLDLGD IARAKFDFDV VGHYSRPEVF SLNIREHPRK AVSFKTSKVM EDESV

Arabidopsis Description

NIT4Bifunctional nitrilase/nitrile hydratase NIT4 [Source:UniProtKB/Swiss-Prot;Acc:P46011]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.