Factsheet for TraesCS6D01G215300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G260800.2	Wheat	cytosol	97.95	97.95
HORVU6Hr1G059740.1	Barley	cytosol	97.07	97.07
HORVU6Hr1G059760.1	Barley	cytosol	83.87	85.63
TraesCS6A01G232400.2	Wheat	cytosol	85.92	85.17
EES05473	Sorghum	cytosol	85.92	84.2
Os02t0635000-01	Rice	cytosol	85.92	82.07
KXG30695	Sorghum	cytosol	81.82	76.86
GSMUA_Achr8P13970_001	Banana	plastid	75.37	74.06
Zm00001d017352_P001	Maize	cytosol	84.46	72.18
TraesCS6D01G215400.2	Wheat	cytosol	76.25	71.43
VIT_06s0080g00950.t01	Wine grape	cytosol	24.34	68.59
CDY35679	Canola	cytosol	70.67	67.7
CDY09130	Canola	cytosol	70.67	67.51
Bra020184.1-P	Field mustard	cytosol	70.09	66.95
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	69.5	66.76

Protein Annotations

Gene3D:3.60.110.10	MapMan:9.5.2.5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	InterPro:IPR003010
InterPro:IPR036526	InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795	ScanProsite:PS00920	ScanProsite:PS00921	PFscan:PS50263
PANTHER:PTHR23088	PANTHER:PTHR23088:SF31	SUPFAM:SSF56317	EnsemblPlantsGene:TraesCS6D01G215300	EnsemblPlants:TraesCS6D01G215300.1	TIGR:cd07564

Description

No Description!

Coordinates

chr6D:+:305608535..305611668

Molecular Weight (calculated)

36268.3 Da

IEP (calculated)

5.394

GRAVY (calculated)

0.063

Length

341 amino acids

Sequence
(BLAST)

001: MALSPASVGP VISEVEMNAG ADQGATTVRA TVVQACSVFY DTPATLDKAE KLIAEAAGYG SQLVLFPEVF VGGYPHGSTF GLTIGSRSAK GKEDFRKYHA
101: AAIDVPGPEV SRLAALAGKY NVFLVIGVVE RAGYTLYNTV LSFDSLGKYL GKHRKLMPTA LERVFWGCGD GSTIPVYDTP LGKVGAVICW ENRMPLIRTA
201: MYAKGVEIYC APTADALPSW QSSMTHIALE GGCFVLTANQ FCRRKDFPPP PEYTFGGHEE EPSPETAVCP GGSAIISPSG TVLAGPNYEG EALLTADLDL
301: GEIVRAKFDF DVVGHYARPE VLSLTVKTEP KHAVSFTSTV G

Best Arabidopsis Sequence Match ( AT5G22300.1 )
(BLAST)

001: MSMQQETSHM TAAPQTNGHQ IFPEIDMSAG DSSSIVRATV VQASTVFYDT PATLDKAERL LSEAAENGSQ LVVFPEAFIG GYPRGSTFEL AIGSRTAKGR
101: DDFRKYHASA IDVPGPEVER LALMAKKYKV YLVMGVIERE GYTLYCTVLF FDSQGLFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADSRETWLA SMTHIALEGG CFVLSANQFC RRKDYPSPPE YMFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYRGEA
301: LITADLDLGD IARAKFDFDV VGHYSRPEVF SLNIREHPRK AVSFKTSKVM EDESV

Arabidopsis Description

NIT4Bifunctional nitrilase/nitrile hydratase NIT4 [Source:UniProtKB/Swiss-Prot;Acc:P46011]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.