Factsheet for HORVU6Hr1G059730.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G232500.1	Wheat	cytosol	76.84	94.78
TraesCS6B01G260700.2	Wheat	cytosol	76.39	94.23
TraesCS6D01G215400.2	Wheat	cytosol	76.17	93.96
Os02t0635200-01	Rice	plasma membrane	71.94	89.23
EES05474	Sorghum	cytosol	71.27	88.64
Zm00001d051214_P001	Maize	cytosol	70.38	87.53
GSMUA_Achr8P13970_001	Banana	plastid	60.36	78.1
HORVU6Hr1G059740.1	Barley	cytosol	57.24	75.37
VIT_06s0080g00950.t01	Wine grape	cytosol	19.15	71.07
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	53.9	68.17
CDY35679	Canola	cytosol	53.9	67.98
HORVU6Hr1G059760.1	Barley	cytosol	50.56	67.96
CDY09130	Canola	cytosol	53.67	67.51
Bra020184.1-P	Field mustard	cytosol	53.45	67.23

Protein Annotations

Gene3D:3.60.110.10	MapMan:9.5.2.5	UniProt:A0A287UC26	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810
EnsemblPlantsGene:HORVU6Hr1G059730	EnsemblPlants:HORVU6Hr1G059730.3	InterPro:IPR003010	InterPro:IPR036526	InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795
ScanProsite:PS00920	ScanProsite:PS00921	PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF31	SUPFAM:SSF56317
UniParc:UPI000B467A0C	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:395830726..395834265

Molecular Weight (calculated)

47737.1 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.019

Length

449 amino acids

Sequence
(BLAST)

001: GQSSLVDGIQ LPVLCRRTVP TIHHTPAWSR GLALSLSSSS SSLTRPALPG PHHPRFPLER PPLLPTSTSS SSSSAPELVR SSEFPRPIPM ALVPSGSGSA
101: PVIAEVEMNG GADPSAATVR ATVVQASTVF YDTPATADKA ERLIAEAAGY GSQLVVFPEA FVGGYPRGST FGFGISISIT NPKDKGKGEF QKYYAAAIDV
201: PGPEVTRLAA MAGKYKVFLV MGVIEREGYT LYCSVLFFDP LGRYLGKHRK LMPTALERII WGFGDGSTIP VYDTPLGKIG ALICWENKMP LLRTALYGKG
301: IEIYCAPTAD SRPVWQASMT HIAMEGGCFV LSANQFCRRK DYPPPSEYAF AGLGEEPSPD TVVCPGGSVI ISPSGEVLAG PNYDGEALIT ADLDMGEIVR
401: AKFDFDVVGH YARPEVLGLV VDDQPHRPVF FTSAAEKAPA AKSDGAAKP

Best Arabidopsis Sequence Match ( AT5G22300.1 )
(BLAST)

001: MSMQQETSHM TAAPQTNGHQ IFPEIDMSAG DSSSIVRATV VQASTVFYDT PATLDKAERL LSEAAENGSQ LVVFPEAFIG GYPRGSTFEL AIGSRTAKGR
101: DDFRKYHASA IDVPGPEVER LALMAKKYKV YLVMGVIERE GYTLYCTVLF FDSQGLFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADSRETWLA SMTHIALEGG CFVLSANQFC RRKDYPSPPE YMFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYRGEA
301: LITADLDLGD IARAKFDFDV VGHYSRPEVF SLNIREHPRK AVSFKTSKVM EDESV

Arabidopsis Description

NIT4Bifunctional nitrilase/nitrile hydratase NIT4 [Source:UniProtKB/Swiss-Prot;Acc:P46011]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.