Factsheet for TraesCS6A01G232500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G215400.2	Wheat	cytosol	98.35	98.35
TraesCS6B01G260700.2	Wheat	cytosol	98.08	98.08
TraesCS6A01G232300.1	Wheat	cytosol	93.41	94.44
Os02t0635200-01	Rice	plasma membrane	90.66	91.16
EES05474	Sorghum	cytosol	89.84	90.58
Zm00001d051214_P001	Maize	cytosol	88.74	89.47
GSMUA_Achr8P13970_001	Banana	plastid	75.82	79.54
HORVU6Hr1G059730.3	Barley	plastid	94.78	76.84
VIT_06s0080g00950.t01	Wine grape	cytosol	23.9	71.9
CDY35679	Canola	cytosol	68.41	69.94
CDY09130	Canola	cytosol	67.86	69.19
AT5G22300.1	Thale cress	cytosol, peroxisome, plastid	67.03	68.73
Bra020184.1-P	Field mustard	cytosol	67.31	68.63
TraesCS6A01G232400.2	Wheat	cytosol	63.74	67.44
TraesCS6A01G340200.1	Wheat	cytosol	20.6	41.21

Protein Annotations

Gene3D:3.60.110.10	MapMan:9.5.2.5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	InterPro:IPR003010
InterPro:IPR036526	InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795	ScanProsite:PS00920	ScanProsite:PS00921	PFscan:PS50263
PANTHER:PTHR23088	PANTHER:PTHR23088:SF31	SUPFAM:SSF56317	EnsemblPlantsGene:TraesCS6A01G232500	EnsemblPlants:TraesCS6A01G232500.1	TIGR:cd07564

Description

No Description!

Coordinates

chr6A:+:440055872..440059053

Molecular Weight (calculated)

38788.4 Da

IEP (calculated)

4.869

GRAVY (calculated)

0.009

Length

364 amino acids

Sequence
(BLAST)

001: MALVPSGSGG APVIAEVEMN GGADQSSATV RATVVQASTV FYDTPATLDK AERLIAEAAG YGSQLVVFLE AFVGGYPRGS TFGFGISISI TNPKDKGKGE
101: FQKYYAAAID VPEKPAGPEV TRLAAMAGKY KVFLVMGVIE REGYTLYCSV LFFDPLGRYL GKHRKLMPTA LERIIWGFGD GSTIPVYDTP LGKIGALICW
201: ENKMPLLRTA LYGKGIEIYC APTADSRPVW QASMTHIAME GGCFVLSANQ FCRRQDYPPP SEYAFAGLGE EPSPDTVVCP GGSVIISPSG EVLAGPNYDG
301: EALITADLDM GEIVRAKFDF DVVGHYSRPE VLSLVVDDQP HRPVSFTSAA EKAPAAKSDG TAKP

Best Arabidopsis Sequence Match ( AT3G44300.1 )
(BLAST)

001: MSTSENTPFN GVASSTIVRA TIVQASTVYN DTPATLEKAN KFIVEAASKG SELVVFPEAF IGGYPRGFRF GLGVGVHNEE GRDEFRKYHA SAIKVPGPEV
101: EKLAELAGKN NVYLVMGAIE KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW ENRMPLYRTA LYAKGIELYC
201: APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF
301: DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK

Arabidopsis Description

NIT2NIT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V952]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.