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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:
  • cytosol 2
  • plastid 1
  • plasma membrane 1
  • mitochondrion 1
  • cytoskeleton 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytoskeleton, cytosol, peroxisome
Any Predictor:cytoskeleton, cytosol, mitochondrion, peroxisome, plasma membrane, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc11g068730.1.1 Tomato extracellular, nucleus 97.44 97.44
KRH30383 Soybean cytosol, nucleus 88.03 88.29
KRH25286 Soybean cytosol 86.89 87.14
VIT_06s0080g00940.t01 Wine grape cytosol 85.75 86.74
CDY35679 Canola cytosol 78.92 77.81
Bra020184.1-P Field mustard cytosol 78.06 76.75
CDY09130 Canola cytosol 78.06 76.75
AT5G22300.1 Thale cress cytosol, peroxisome, plastid 76.35 75.49
TraesCS6A01G340200.1 Wheat cytosol 19.09 36.81
Protein Annotations
EntrezGene:102595618Gene3D:3.60.110.10MapMan:9.5.2.5InterPro:C-N_HydrolaseInterPro:C-N_Hydrolase_sfGO:GO:0003674
GO:GO:0003824GO:GO:0006807GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016810
InterPro:IPR003010InterPro:IPR036526UniProt:M1CHQ6InterPro:Nitrilase/CN_hydratase_CSPFAM:PF00795EnsemblPlantsGene:PGSC0003DMG400026329
PGSC:PGSC0003DMG400026329EnsemblPlants:PGSC0003DMT400067695ScanProsite:PS00920ScanProsite:PS00921PFscan:PS50263PANTHER:PTHR23088
PANTHER:PTHR23088:SF31SUPFAM:SSF56317UniParc:UPI000296CB3CRefSeq:XP_006362863.1SEG:seg:
Description
Bifunctional nitrilase/nitrile hydratase NIT4B [Source:PGSC_GENE;Acc:PGSC0003DMG400026329]
Coordinates
chr11:-:40616871..40621984
Molecular Weight (calculated)
37870.2 Da
IEP (calculated)
4.874
GRAVY (calculated)
0.008
Length
351 amino acids
Sequence
(BLAST)
001: MALVPTPVMN EGPLFAEVEM GGDSSSSTVR ATVVQASTIF YDTPATLDKA ERLLAEAASY GAQLVVFPEA FIGGYPRGLT FGVSIGNRTD KGKEEFRKYH
101: ASAIDVPGPE VDRLAAMAGK YKVYLVMGVI ERDGYTLYCT VLFFDSQGHY LGKHRKIMPT ALERIIWGFG DGSTIPVYDT PIGKIGAAIC WENRMPLLRT
201: AMYAKGIEIY CAPTADAREV WQASMTHIAL EGGCFVLSAN QFCRRKDYPP PPEYVFSGTE EDLTPDSVVC AGGSVIISPS GAVLAGPNYD GEALISADLD
301: LGEIVRAKFD FDVVGHYARP EILSLIVKDH PVSPVSFTST SSTSKAESSS K
Best Arabidopsis Sequence Match ( AT5G22300.1 )
(BLAST)
001: MSMQQETSHM TAAPQTNGHQ IFPEIDMSAG DSSSIVRATV VQASTVFYDT PATLDKAERL LSEAAENGSQ LVVFPEAFIG GYPRGSTFEL AIGSRTAKGR
101: DDFRKYHASA IDVPGPEVER LALMAKKYKV YLVMGVIERE GYTLYCTVLF FDSQGLFLGK HRKLMPTALE RCIWGFGDGS TIPVFDTPIG KIGAAICWEN
201: RMPSLRTAMY AKGIEIYCAP TADSRETWLA SMTHIALEGG CFVLSANQFC RRKDYPSPPE YMFSGSEESL TPDSVVCAGG SSIISPLGIV LAGPNYRGEA
301: LITADLDLGD IARAKFDFDV VGHYSRPEVF SLNIREHPRK AVSFKTSKVM EDESV
Arabidopsis Description
NIT4Bifunctional nitrilase/nitrile hydratase NIT4 [Source:UniProtKB/Swiss-Prot;Acc:P46011]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.