CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028932.1-P	Field mustard	cytosol	97.38	97.38
CDY36797	Canola	cytosol	96.21	96.21
CDY71996	Canola	cytosol, extracellular, nucleus	39.94	86.16
AT3G44300.1	Thale cress	cytosol, peroxisome, plastid	82.8	83.78
CDY02731	Canola	cytosol	80.76	80.06
AT3G44310.1	Thale cress	plastid	79.3	78.61
CDY47302	Canola	cytosol	80.17	78.57
AT3G44320.1	Thale cress	cytosol	75.8	75.14
CDY09130	Canola	cytosol	64.14	61.62
CDY35679	Canola	cytosol	63.27	60.96
CDY08691	Canola	cytosol	79.01	59.69

Protein Annotations

Gene3D:3.60.110.10	MapMan:9.5.2.5	GO:A0A078FC02	UniProt:A0A078FC02	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf
EnsemblPlants:CDY11930	ProteinID:CDY11930	ProteinID:CDY11930.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006807
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	EnsemblPlantsGene:GSBRNA2T00060776001	InterPro:IPR003010
InterPro:IPR036526	InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795	ScanProsite:PS00920	ScanProsite:PS00921	PFscan:PS50263
PANTHER:PTHR23088	PANTHER:PTHR23088:SF31	SUPFAM:SSF56317	UniParc:UPI0004EE1AEA	SEG:seg	:

Description

BnaC03g13560DBnaC03g13560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FC02]

Coordinates

chrLK032015:-:494068..496024

Molecular Weight (calculated)

37672.6 Da

IEP (calculated)

5.809

GRAVY (calculated)

-0.292

Length

343 amino acids

Sequence
(BLAST)

001: MSTPKNTTQA NGDSSSSIVR ATIVQASTVY NDTPKTIEKA EKLIAEAASN GSELVVFPEG FIGGYPRGFR FGIAVGIHNE DGRDDFRKYH DSAIHVPGPE
101: VDKLAELARK NNVYLVMGAI EKDGYTLYCT ALFFNSEGRY LGKHRKVMPT SLERCIWGFG DGSTIPVYDT PIGKLGAAIC WENRMPLYRT ALYGKGVELY
201: CAPTADGSKE WQSSMMHIAM EGGCFVLSAC QFCQRKDFPA HVDHLFTDWY DDQHDEAIVS QGGSVIISPL GKVLAGPNFE SEGLITADLD LGDIARAKLY
301: FDVVGHYSKP DVFNLTVNEH PKKPVTFVSK TVKAEDGSES KEK

Best Arabidopsis Sequence Match ( AT3G44300.1 )
(BLAST)

001: MSTSENTPFN GVASSTIVRA TIVQASTVYN DTPATLEKAN KFIVEAASKG SELVVFPEAF IGGYPRGFRF GLGVGVHNEE GRDEFRKYHA SAIKVPGPEV
101: EKLAELAGKN NVYLVMGAIE KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW ENRMPLYRTA LYAKGIELYC
201: APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF
301: DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK

Arabidopsis Description

NIT2NIT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V952]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.