CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023598.1-P	Field mustard	cytosol	97.98	98.55
CDY47302	Canola	cytosol	91.91	90.86
CDY71996	Canola	cytosol, extracellular, nucleus	41.62	90.57
CDY36797	Canola	cytosol	80.64	81.34
CDY11930	Canola	cytosol	80.06	80.76
AT3G44300.1	Thale cress	cytosol, peroxisome, plastid	77.17	78.76
AT3G44310.1	Thale cress	plastid	73.99	73.99
AT3G44320.1	Thale cress	cytosol	71.39	71.39
CDY08691	Canola	cytosol	91.33	69.6
CDY09130	Canola	cytosol	59.83	57.98
CDY35679	Canola	cytosol	58.96	57.3

Protein Annotations

Gene3D:3.60.110.10	MapMan:9.5.2.5	GO:A0A078ENJ1	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	EnsemblPlants:CDY02731
ProteinID:CDY02731	ProteinID:CDY02731.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006807	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	EnsemblPlantsGene:GSBRNA2T00114885001	InterPro:IPR003010	InterPro:IPR036526
InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795	ScanProsite:PS00920	ScanProsite:PS00921	PFscan:PS50263	PANTHER:PTHR23088
PANTHER:PTHR23088:SF5	SUPFAM:SSF56317	UniParc:UPI0004EDE00C	:	:	:

Description

BnaC02g07040D

Coordinates

chrLK031936:+:1105560..1110869

Molecular Weight (calculated)

37910.2 Da

IEP (calculated)

5.876

GRAVY (calculated)

-0.157

Length

346 amino acids

Sequence
(BLAST)

001: MATAPKATTP GPCDFPSTIV RATIVQASTV YNDTPKTIEK AGEFIAQAAA DGAQLVVFPE AYIGGYPRGY RFGIGVGVHN EAGRDCFRKY HASAIVVPGP
101: EVDKLAEMAR KNKVYLVMGA MEKDGYTLYC TALFFSSEGR FLGKHRKVMP TSLERCIWGY GDGSTIPVYD TPLGKLGAAI CWENRMPLLR TSFGLLHAGI
201: ELYCAPTADG SKEWQSSMMH IAIEGGCFVM SACQFCVRKD FPDHADYLFT DWYPEQHEEA IVSQGGSVII SPLGKILAGP NFESEGLITA DLDLGDIARA
301: KLYFDVVGHY SRPDIFNLRV NENQNKPVTF VSKSVKAEDD SEPQNK

Best Arabidopsis Sequence Match ( AT3G44300.1 )
(BLAST)

001: MSTSENTPFN GVASSTIVRA TIVQASTVYN DTPATLEKAN KFIVEAASKG SELVVFPEAF IGGYPRGFRF GLGVGVHNEE GRDEFRKYHA SAIKVPGPEV
101: EKLAELAGKN NVYLVMGAIE KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW ENRMPLYRTA LYAKGIELYC
201: APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF
301: DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK

Arabidopsis Description

NIT2NIT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V952]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.