Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028932.1-P | Field mustard | cytosol | 97.96 | 97.96 |
| CDY11930 | Canola | cytosol | 96.21 | 96.21 |
| CDY71996 | Canola | cytosol, extracellular, nucleus | 39.94 | 86.16 |
| AT3G44300.1 | Thale cress | cytosol, peroxisome, plastid | 83.97 | 84.96 |
| CDY02731 | Canola | cytosol | 81.34 | 80.64 |
| AT3G44310.1 | Thale cress | plastid | 80.76 | 80.06 |
| CDY47302 | Canola | cytosol | 80.76 | 79.14 |
| AT3G44320.1 | Thale cress | cytosol | 76.68 | 76.01 |
| CDY09130 | Canola | cytosol | 64.72 | 62.18 |
| CDY35679 | Canola | cytosol | 63.85 | 61.52 |
| CDY08691 | Canola | cytosol | 79.59 | 60.13 |
Protein Annotations
| Gene3D:3.60.110.10 | MapMan:9.5.2.5 | GO:A0A078HG51 | UniProt:A0A078HG51 | InterPro:C-N_Hydrolase | InterPro:C-N_Hydrolase_sf |
| EnsemblPlants:CDY36797 | ProteinID:CDY36797 | ProteinID:CDY36797.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006807 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016810 | EnsemblPlantsGene:GSBRNA2T00062630001 | InterPro:IPR003010 |
| InterPro:IPR036526 | InterPro:Nitrilase/CN_hydratase_CS | PFAM:PF00795 | ScanProsite:PS00920 | ScanProsite:PS00921 | PFscan:PS50263 |
| PANTHER:PTHR23088 | PANTHER:PTHR23088:SF5 | SUPFAM:SSF56317 | UniParc:UPI0004EDC80E | SEG:seg | : |
Description
BnaA03g10890DBnaA03g10890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HG51]
Coordinates
chrLK032383:+:328989..330979
Molecular Weight (calculated)
37710.7 Da
IEP (calculated)
5.810
GRAVY (calculated)
-0.236
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTLKNTTQV NGDASSSIVR ATIVQASTVY NDTPKTIEKA EKLIAEAASN GSELVVFPEG FIGGYPRGFR FGIAVGIHNE EGRDDFRKYH ASAIHVPGPE
101: VDKLAELARK NNVYLVMGAI EKDGYTLYCT ALFFNSEGRF LGKHRKVMPT SLERCIWGFG DGSTIPVYDT PIGKLGAAIC WENRMPLYRT ALYGKGVELY
201: CAPTADGSKE WQSSMMHIAM EGGCFVLSAC QFCQRKDFPA HVDHLFTDWY DDQHDEAIVS QGGSVIISPL GKVLAGPNFE SEGLITADLD LGDIARAKLY
301: FDVVGHYSKP DVFNLTVNEH PKKPVTFVSK TVKAEDDTEA KEK
101: VDKLAELARK NNVYLVMGAI EKDGYTLYCT ALFFNSEGRF LGKHRKVMPT SLERCIWGFG DGSTIPVYDT PIGKLGAAIC WENRMPLYRT ALYGKGVELY
201: CAPTADGSKE WQSSMMHIAM EGGCFVLSAC QFCQRKDFPA HVDHLFTDWY DDQHDEAIVS QGGSVIISPL GKVLAGPNFE SEGLITADLD LGDIARAKLY
301: FDVVGHYSKP DVFNLTVNEH PKKPVTFVSK TVKAEDDTEA KEK
001: MSTSENTPFN GVASSTIVRA TIVQASTVYN DTPATLEKAN KFIVEAASKG SELVVFPEAF IGGYPRGFRF GLGVGVHNEE GRDEFRKYHA SAIKVPGPEV
101: EKLAELAGKN NVYLVMGAIE KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW ENRMPLYRTA LYAKGIELYC
201: APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF
301: DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK
101: EKLAELAGKN NVYLVMGAIE KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW ENRMPLYRTA LYAKGIELYC
201: APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF
301: DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK
Arabidopsis Description
NIT2NIT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V952]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.