CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035006.1-P	Field mustard	cytosol	93.71	99.39
CDY02731	Canola	cytosol	90.86	91.91
CDY71996	Canola	cytosol, extracellular, nucleus	40.86	89.94
CDY36797	Canola	cytosol	79.14	80.76
CDY11930	Canola	cytosol	78.57	80.17
AT3G44300.1	Thale cress	cytosol, peroxisome, plastid	74.86	77.29
CDY08691	Canola	cytosol	97.43	75.11
AT3G44310.1	Thale cress	plastid	72.86	73.7
AT3G44320.1	Thale cress	cytosol	71.43	72.25
CDY09130	Canola	cytosol	58.29	57.14
CDY35679	Canola	cytosol	57.71	56.74

Protein Annotations

Gene3D:3.60.110.10	MapMan:9.5.2.5	GO:A0A078IAX2	UniProt:A0A078IAX2	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf
EnsemblPlants:CDY47302	ProteinID:CDY47302	ProteinID:CDY47302.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006807
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	EnsemblPlantsGene:GSBRNA2T00087133001	InterPro:IPR003010
InterPro:IPR036526	InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795	ScanProsite:PS00920	ScanProsite:PS00921	PFscan:PS50263
PANTHER:PTHR23088	PANTHER:PTHR23088:SF5	SUPFAM:SSF56317	UniParc:UPI0004EDF9D9	:	:

Description

BnaA06g38980DBnaA06g38980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IAX2]

Coordinates

chrLK032707:+:87863..89796

Molecular Weight (calculated)

38442.7 Da

IEP (calculated)

5.436

GRAVY (calculated)

-0.218

Length

350 amino acids

Sequence
(BLAST)

001: MSGTEEMSKA LKASTPGFCD MPSTIVRASI VQASTVYNDT PKTIEKAGEF IAQAASDGAQ LVVFPEAYIG GYPRGYRFGI GVGVHNEAGR DCFRRYHASA
101: IVVPGPEVDK LAEMARKNKV YLMMGAMEKD GYTLYCTALF FSSEGRFLGK HRKVMPTSLE RCIWGYGDGS TIPVYDTPLG KLGAAICWEN RMPLLRTSLY
201: GKGIELYCAP TADGSTEWQS SMMHIALEGG CFVMSACQFC KRKDFPEHAD YLFTDWYDDQ HQEAIVSQGG SVIISPLGKI LAGPNFESEG LVTADLDLGD
301: IARAKLYFDV VGHYSRPDIF NLRVNENQNK PVTFVSKSVK AADDSEPQDN

Best Arabidopsis Sequence Match ( AT3G44300.1 )
(BLAST)

001: MSTSENTPFN GVASSTIVRA TIVQASTVYN DTPATLEKAN KFIVEAASKG SELVVFPEAF IGGYPRGFRF GLGVGVHNEE GRDEFRKYHA SAIKVPGPEV
101: EKLAELAGKN NVYLVMGAIE KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW ENRMPLYRTA LYAKGIELYC
201: APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF
301: DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK

Arabidopsis Description

NIT2NIT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V952]
SUBAcon: [cytosol,peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.