CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47302	Canola	cytosol	75.11	97.43
CDY02731	Canola	cytosol	69.6	91.33
CDY71996	Canola	cytosol, extracellular, nucleus	30.62	87.42
CDY36797	Canola	cytosol	60.13	79.59
CDY11930	Canola	cytosol	59.69	79.01
AT3G44300.1	Thale cress	cytosol, peroxisome, plastid	58.15	77.88
AT3G44310.1	Thale cress	plastid	56.39	73.99
AT3G44320.1	Thale cress	cytosol	55.29	72.54
CDY09130	Canola	cytosol	45.59	57.98
CDY35679	Canola	cytosol	45.15	57.58

Protein Annotations

Gene3D:3.60.110.10	MapMan:9.5.2.5	GO:A0A078F5L1	UniProt:A0A078F5L1	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf
EnsemblPlants:CDY08691	ProteinID:CDY08691	ProteinID:CDY08691.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006807
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810	EnsemblPlantsGene:GSBRNA2T00000574001	InterPro:IPR003010
InterPro:IPR036526	InterPro:Nitrilase/CN_hydratase_CS	PFAM:PF00795	ScanProsite:PS00920	ScanProsite:PS00921	PFscan:PS50263
PANTHER:PTHR23088	PANTHER:PTHR23088:SF5	SUPFAM:SSF56317	UniParc:UPI0004EDEBF8	SEG:seg	:

Description

BnaC03g54910DBnaC03g54910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F5L1]

Coordinates

chrLK031988:+:315849..322157

Molecular Weight (calculated)

49621.8 Da

IEP (calculated)

7.088

GRAVY (calculated)

0.011

Length

454 amino acids

Sequence
(BLAST)

001: MSGTEEMSKA LKATTPGFCD MPSTIVRASI VQASTVYNDT PKTIEKAGEF IAQAASDGAQ LVVFPEAYIG GYPRGYRFGI GVGVHNEAGR DCFRRYHASA
101: IVVPGPEVDK LAEMARKNKV YLVMGAMEKD GYTLYCTALF FSSEGRFLGK HRKVMPTSLE RCIWGYGDGS TIPVYDTPLG KLGAAICWEN RMPLLRTSLY
201: GKGIELYCAP TADGSTEWQS SMMHIALEGG CFVMSACQFC LRKDFPEHAD YLFTDWMEDP TIALNMCLST SLKLGLSVRS NPKTLSCSRL SSSVLGSVVL
301: GLSISSSDHS WLCFPRCLVK SISSCCKLLI ALLTSKILVR FEVLPYTLCK VSHSFFAVSQ CETRERDAIV SQGGSVIISP LGKILAGPNF ESEGLVTADL
401: DLGDIARAKL YFDVVGHYSR PDIFNLRVNE NQNKPVTFVS KSVKAADDSE PQDN

Best Arabidopsis Sequence Match ( AT3G44300.1 )
(BLAST)

001: MSTSENTPFN GVASSTIVRA TIVQASTVYN DTPATLEKAN KFIVEAASKG SELVVFPEAF IGGYPRGFRF GLGVGVHNEE GRDEFRKYHA SAIKVPGPEV
101: EKLAELAGKN NVYLVMGAIE KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW ENRMPLYRTA LYAKGIELYC
201: APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF
301: DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK

Arabidopsis Description

NIT2NIT2 [Source:UniProtKB/TrEMBL;Acc:A0A178V952]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.