Factsheet for Bra002259.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35862	Canola	cytosol	99.61	86.29
CDX92503	Canola	cytosol	99.61	86.29
Bra020060.1-P	Field mustard	cytosol	97.3	84.28
Bra006516.1-P	Field mustard	cytosol	96.53	83.61
AT5G19760.1	Thale cress	cytosol	93.44	81.21
Solyc01g005620.2.1	Tomato	plastid	86.1	75.08
KRH42853	Soybean	endoplasmic reticulum, mitochondrion, nucleus	86.1	74.09
PGSC0003DMT400081953	Potato	cytosol, peroxisome, plastid	84.94	74.07
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	85.33	73.91
GSMUA_Achr6P14540_001	Banana	cytosol, mitochondrion, plastid	85.33	73.91
GSMUA_Achr9P28780_001	Banana	cytosol, peroxisome, plastid	85.33	73.91
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	84.56	73.0
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	84.17	72.91
Os05t0208000-01	Rice	cytosol, extracellular, peroxisome	85.71	72.55
TraesCS1A01G124600.1	Wheat	golgi, unclear	84.56	72.52
TraesCS1B01G142400.1	Wheat	cytosol, extracellular, peroxisome	84.56	72.52
TraesCS1D01G129200.2	Wheat	cytosol, extracellular, peroxisome	84.56	72.52
HORVU1Hr1G028720.1	Barley	cytosol, extracellular, peroxisome	83.78	71.85
HORVU3Hr1G025820.1	Barley	plasma membrane	84.17	71.24
Os11t0432400-01	Rice	cytosol	84.56	70.87
TraesCS3B01G153900.1	Wheat	golgi	83.4	70.59
Zm00001d037725_P001	Maize	plastid	83.78	70.45
TraesCS3D01G136800.1	Wheat	golgi	83.4	70.36
EES17872	Sorghum	cytosol, extracellular, peroxisome, plastid	83.4	70.13
TraesCS3A01G135800.1	Wheat	cytosol	82.63	69.93
Zm00001d037727_P001	Maize	plastid	83.78	69.77
VIT_06s0004g00470.t01	Wine grape	cytosol	83.4	62.61
Bra013815.1-P	Field mustard	cytosol, plasma membrane, plastid	37.84	31.11
Bra038517.1-P	Field mustard	cytosol	35.52	29.21
Bra030231.1-P	Field mustard	cytosol	35.52	29.02
Bra006022.1-P	Field mustard	plasma membrane	36.29	28.06
Bra026855.1-P	Field mustard	mitochondrion	31.27	26.3
Bra020342.1-P	Field mustard	plasma membrane	28.96	24.83
Bra003170.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	28.57	24.34
Bra007046.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	27.8	23.61
Bra014840.1-P	Field mustard	cytosol, peroxisome, plastid	27.03	22.95
Bra034186.1-P	Field mustard	plastid	25.1	20.7
Bra002603.1-P	Field mustard	cytosol	25.48	20.25
Bra022065.1-P	Field mustard	cytosol, mitochondrion, plastid	22.78	19.8
Bra017524.1-P	Field mustard	cytosol, mitochondrion, plastid	22.78	19.67
Bra024994.1-P	Field mustard	cytosol, mitochondrion, plastid	21.62	18.67
Bra018517.1-P	Field mustard	cytosol	17.37	18.22
Bra035205.1-P	Field mustard	cytosol, mitochondrion, plastid	18.92	15.71
Bra021881.1-P	Field mustard	cytosol, peroxisome, plastid	18.15	15.46
Bra005690.1-P	Field mustard	cytosol	23.17	14.89

Protein Annotations

EnsemblPlants:Bra002259.1	EnsemblPlants:Bra002259.1-P	EnsemblPlantsGene:Bra002259	Gene3D:1.50.40.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF427	PFAM:PF00153	PFscan:PS50920	SUPFAM:SSF103506	UniParc:UPI0002544FAB	UniProt:M4CDH8
MapMan:5.1.1.1	MapMan:24.2.13	:	:	:	:

Description

AT5G19760 (E=2e-085) | dicarboxylate/tricarboxylate carrier (DTC)

Coordinates

chrA10:+:10621452..10622909

Molecular Weight (calculated)

27717.1 Da

IEP (calculated)

9.967

GRAVY (calculated)

0.159

Length

259 amino acids

Sequence
(BLAST)

001: MAEEKKVAPT GVWTAVKPFV NGGASGMLAT CVIQPIDMIK VRIQLGQGSA VSVTKNMLKN DGIGAFYKGL SAGLLRQATY TTARLGSFKM LTAKAIEAND
101: GKPLPLYQKA LCGLTAGAIG ACVGSPADLA LIRMQADNTL PLAQRRNYTN AFHALYRISA DEGVLALWKG ASAVSGFCAA ACSLPFDFVK TQIQKMQPDA
201: QGKYPYTGSL DCAMQTLKSG GPLKFYTGFP VYCVRIAPHV MMTWIFLNQI TKFQKTIGL

Best Arabidopsis Sequence Match ( AT5G19760.1 )
(BLAST)

001: MAEEKKAPIS VWTTVKPFVN GGASGMLATC VIQPIDMIKV RIQLGQGSAA SITTNMLKNE GVGAFYKGLS AGLLRQATYT TARLGSFKLL TAKAIESNDG
101: KPLPLYQKAL CGLTAGAIGA CVGSPADLAL IRMQADNTLP LAQRRNYTNA FHALTRISAD EGVLALWKGC GPTVVRAMAL NMGMLASYDQ SAEYMRDNLG
201: FGEMSTVVGA SAVSGFCAAA CSLPFDFVKT QIQKMQPDAQ GKYPYTGSLD CAMKTLKEGG PLKFYSGFPV YCVRIAPHVM MTWIFLNQIT KFQKKIGM

Arabidopsis Description

DTCMitochondrial dicarboxylate/tricarboxylate transporter DTC [Source:UniProtKB/Swiss-Prot;Acc:Q9C5M0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.