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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 2
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002259.1-P Field mustard cytosol 86.29 99.61
CDX92503 Canola cytosol 99.33 99.33
CDY42293 Canola cytosol 98.66 98.66
CDY44940 Canola cytosol 98.33 98.33
CDX88877 Canola cytosol 97.32 97.32
AT5G19760.1 Thale cress cytosol 93.98 94.3
CDX70888 Canola cytosol, extracellular, plastid 78.6 92.16
Solyc01g005620.2.1 Tomato plastid 85.62 86.2
PGSC0003DMT400081953 Potato cytosol, peroxisome, plastid 84.62 85.19
KRH42853 Soybean endoplasmic reticulum, mitochondrion, nucleus 84.95 84.39
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 84.28 84.28
GSMUA_Achr9P28780_001 Banana cytosol, peroxisome, plastid 84.28 84.28
GSMUA_Achr6P14540_001 Banana cytosol, mitochondrion, plastid 83.95 83.95
GSMUA_Achr10P... Banana cytosol, peroxisome, plastid 83.61 83.61
GSMUA_Achr10P... Banana cytosol, mitochondrion, plastid 83.61 83.33
Os05t0208000-01 Rice cytosol, extracellular, peroxisome 84.62 82.68
TraesCS1A01G124600.1 Wheat golgi, unclear 82.94 82.12
TraesCS1B01G142400.1 Wheat cytosol, extracellular, peroxisome 82.94 82.12
TraesCS1D01G129200.2 Wheat cytosol, extracellular, peroxisome 82.94 82.12
HORVU1Hr1G028720.1 Barley cytosol, extracellular, peroxisome 82.27 81.46
HORVU3Hr1G025820.1 Barley plasma membrane 82.61 80.72
Os11t0432400-01 Rice cytosol 83.28 80.58
EES17872 Sorghum cytosol, extracellular, peroxisome, plastid 82.94 80.52
Zm00001d037725_P001 Maize plastid 82.94 80.52
TraesCS3B01G153900.1 Wheat golgi 81.94 80.07
TraesCS3D01G136800.1 Wheat golgi 81.94 79.8
Zm00001d037727_P001 Maize plastid 82.94 79.74
TraesCS3A01G135800.1 Wheat cytosol 81.27 79.41
VIT_06s0004g00470.t01 Wine grape cytosol 82.27 71.3
CDY34292 Canola cytosol, plasma membrane, plastid 37.79 35.87
CDY03439 Canola cytosol, plasma membrane, plastid 37.46 35.56
CDY25603 Canola cytosol 35.12 33.12
CDY13754 Canola cytosol 34.78 33.02
CDX89481 Canola cytosol 34.78 32.81
CDX76916 Canola cytosol 34.45 32.7
CDX81127 Canola plasma membrane 36.45 32.54
CDY67400 Canola plasma membrane 36.12 32.24
CDX97871 Canola cytosol 11.37 30.91
CDY33772 Canola mitochondrion 31.44 30.52
CDY13183 Canola plasma membrane 28.09 29.89
CDY02849 Canola plasma membrane 30.1 29.8
CDY32672 Canola plasma membrane 30.1 29.8
CDX80317 Canola endoplasmic reticulum, plasma membrane 29.43 28.85
CDY51585 Canola plasma membrane 29.1 28.62
CDX67588 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 29.1 28.62
CDX78208 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 28.43 27.87
CDX73508 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 28.43 27.87
CDX76170 Canola cytosol, peroxisome, plastid 27.76 27.21
CDY27701 Canola cytosol 29.43 25.88
CDY21942 Canola plastid 26.42 25.08
CDY55007 Canola cytosol, peroxisome, plasma membrane 30.43 24.93
CDY22103 Canola cytosol, endoplasmic reticulum, peroxisome, plastid 26.09 24.84
CDX97299 Canola extracellular 20.4 24.5
CDX91241 Canola cytosol 22.74 23.45
CDY03190 Canola cytosol, mitochondrion, plastid 22.74 22.67
CDX87675 Canola cytosol, mitochondrion, plastid 22.41 22.48
CDY37150 Canola cytosol, mitochondrion, plastid 22.41 22.33
CDY35182 Canola cytosol, mitochondrion, plastid 22.41 22.33
CDY58507 Canola cytosol, mitochondrion, plastid 21.74 21.67
CDX77693 Canola cytosol, mitochondrion, plastid 21.4 21.33
CDX91242 Canola extracellular 1.34 21.05
CDY11206 Canola cytosol 22.41 19.82
CDY37683 Canola cytosol, peroxisome, plastid 18.39 18.09
CDY57210 Canola cytosol, peroxisome, plastid 18.06 17.76
CDX87281 Canola cytosol, mitochondrion, plastid 18.39 17.63
CDY58780 Canola cytosol, mitochondrion, plastid 18.06 17.31
CDX80777 Canola cytosol 22.74 16.75
Protein Annotations
Gene3D:1.50.40.10MapMan:24.2.13MapMan:5.1.1.1GO:A0A078HDG1UniProt:A0A078HDG1EnsemblPlants:CDY35862
ProteinID:CDY35862ProteinID:CDY35862.1GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00059396001InterPro:IPR018108InterPro:IPR023395InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrierInterPro:Mt_carrier_dom_sfPFAM:PF00153PRINTS:PR00926PFscan:PS50920PANTHER:PTHR24089
PANTHER:PTHR24089:SF427SUPFAM:SSF103506UniParc:UPI0004EDC3CB:::
Description
BnaC09g37940DBnaC09g37940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDG1]
Coordinates
chrLK032362:+:355805..357776
Molecular Weight (calculated)
31921.3 Da
IEP (calculated)
9.588
GRAVY (calculated)
0.173
Length
299 amino acids
Sequence
(BLAST)
001: MAEEKKVAPI GVWTAVKPFV NGGASGMLAT CVIQPIDMIK VRIQLGQGSA VSVTKNMLKN DGIGAFYKGL SAGLLRQATY TTARLGSFKM LTAKAIEAND
101: GKPLPLYQKA LCGLTAGAIG ACVGSPADLA LIRMQADNTL PLAQRRNYTN AFHALYRISA DEGVLALWKG CGPTVVRAMA LNMGMLASYD QSAEYMRDNL
201: GLGETSTVVG ASAVSGFCAA ACSLPFDFVK TQIQKMQPDA QGKYPYTGSL DCAMQTLKSG GPLKFYTGFP VYCVRIAPHV MMTWIFLNQI TKFQKTIGL
Best Arabidopsis Sequence Match ( AT5G19760.1 )
(BLAST)
001: MAEEKKAPIS VWTTVKPFVN GGASGMLATC VIQPIDMIKV RIQLGQGSAA SITTNMLKNE GVGAFYKGLS AGLLRQATYT TARLGSFKLL TAKAIESNDG
101: KPLPLYQKAL CGLTAGAIGA CVGSPADLAL IRMQADNTLP LAQRRNYTNA FHALTRISAD EGVLALWKGC GPTVVRAMAL NMGMLASYDQ SAEYMRDNLG
201: FGEMSTVVGA SAVSGFCAAA CSLPFDFVKT QIQKMQPDAQ GKYPYTGSLD CAMKTLKEGG PLKFYSGFPV YCVRIAPHVM MTWIFLNQIT KFQKKIGM
Arabidopsis Description
DTCMitochondrial dicarboxylate/tricarboxylate transporter DTC [Source:UniProtKB/Swiss-Prot;Acc:Q9C5M0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.