Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G01340.1 | Thale cress | cytosol, mitochondrion, plastid | 84.62 | 92.56 |
| Bra005690.1-P | Field mustard | cytosol | 99.11 | 83.13 |
| GSMUA_Achr7P15600_001 | Banana | mitochondrion | 46.45 | 82.63 |
| VIT_08s0217g00010.t01 | Wine grape | cytosol, mitochondrion, nucleus | 74.56 | 82.35 |
| KRH16814 | Soybean | cytosol | 73.96 | 79.11 |
| GSMUA_Achr10P... | Banana | cytosol | 51.48 | 77.68 |
| Os03t0292200-01 | Rice | peroxisome | 72.78 | 77.6 |
| CDX80777 | Canola | cytosol | 93.2 | 77.59 |
| TraesCS4B01G193900.1 | Wheat | plastid | 72.49 | 75.62 |
| TraesCS4A01G110200.1 | Wheat | plastid | 72.49 | 75.62 |
| TraesCS4D01G194800.1 | Wheat | plastid | 72.78 | 75.46 |
| EER95032 | Sorghum | plastid | 71.6 | 72.67 |
| KRH72424 | Soybean | cytosol | 73.08 | 72.22 |
| PGSC0003DMT400028643 | Potato | cytosol, mitochondrion, nucleus | 73.08 | 71.39 |
| HORVU4Hr1G056100.1 | Barley | mitochondrion | 71.89 | 69.03 |
| Zm00001d028753_P003 | Maize | plastid | 71.6 | 66.12 |
| CDY03190 | Canola | cytosol, mitochondrion, plastid | 23.08 | 26.0 |
| CDX87675 | Canola | cytosol, mitochondrion, plastid | 22.78 | 25.84 |
| CDX76916 | Canola | cytosol | 23.96 | 25.71 |
| CDY13754 | Canola | cytosol | 23.96 | 25.71 |
| CDY35182 | Canola | cytosol, mitochondrion, plastid | 22.78 | 25.67 |
| CDY37150 | Canola | cytosol, mitochondrion, plastid | 22.78 | 25.67 |
| CDX89481 | Canola | cytosol | 23.96 | 25.55 |
| CDY25603 | Canola | cytosol | 23.96 | 25.55 |
| CDX97299 | Canola | extracellular | 18.64 | 25.3 |
| CDY03439 | Canola | cytosol, plasma membrane, plastid | 23.37 | 25.08 |
| CDY34292 | Canola | cytosol, plasma membrane, plastid | 23.37 | 25.08 |
| CDX91241 | Canola | cytosol | 21.3 | 24.83 |
| CDY58507 | Canola | cytosol, mitochondrion, plastid | 21.89 | 24.67 |
| CDY22103 | Canola | cytosol, endoplasmic reticulum, peroxisome, plastid | 22.78 | 24.52 |
| CDY21942 | Canola | plastid | 22.78 | 24.44 |
| CDX77693 | Canola | cytosol, mitochondrion, plastid | 21.6 | 24.33 |
| CDX87281 | Canola | cytosol, mitochondrion, plastid | 22.19 | 24.04 |
| CDY58780 | Canola | cytosol, mitochondrion, plastid | 22.19 | 24.04 |
| CDY51585 | Canola | plasma membrane | 21.6 | 24.01 |
| CDX67588 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 21.6 | 24.01 |
| CDX78208 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 21.6 | 23.93 |
| CDX73508 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 21.6 | 23.93 |
| CDY13183 | Canola | plasma membrane | 19.82 | 23.84 |
| CDX97871 | Canola | cytosol | 7.69 | 23.64 |
| CDX88877 | Canola | cytosol | 20.71 | 23.41 |
| CDX76170 | Canola | cytosol, peroxisome, plastid | 21.01 | 23.28 |
| CDY44940 | Canola | cytosol | 20.12 | 22.74 |
| CDY42293 | Canola | cytosol | 19.82 | 22.41 |
| CDY35862 | Canola | cytosol | 19.82 | 22.41 |
| CDX92503 | Canola | cytosol | 19.82 | 22.41 |
| CDY67400 | Canola | plasma membrane | 21.89 | 22.09 |
| CDX81127 | Canola | plasma membrane | 21.89 | 22.09 |
| CDY57210 | Canola | cytosol, peroxisome, plastid | 19.82 | 22.04 |
| CDY33772 | Canola | mitochondrion | 19.82 | 21.75 |
| CDY37683 | Canola | cytosol, peroxisome, plastid | 19.53 | 21.71 |
| CDY27701 | Canola | cytosol | 21.01 | 20.88 |
| CDY32672 | Canola | plasma membrane | 18.64 | 20.86 |
| CDX70888 | Canola | cytosol, extracellular, plastid | 15.68 | 20.78 |
| CDX80317 | Canola | endoplasmic reticulum, plasma membrane | 18.64 | 20.66 |
| CDY02849 | Canola | plasma membrane | 18.34 | 20.53 |
| CDY55007 | Canola | cytosol, peroxisome, plasma membrane | 19.23 | 17.81 |
| CDX91242 | Canola | extracellular | 0.3 | 5.26 |
Protein Annotations
| EnsemblPlants:CDY11206 | EnsemblPlantsGene:GSBRNA2T00049224001 | Gene3D:1.50.40.10 | GO:A0A078FCY5 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | ncoils:Coil |
| PANTHER:PTHR24089 | PANTHER:PTHR24089:SF396 | PFAM:PF00153 | PFscan:PS50920 | ProteinID:CDY11206 | ProteinID:CDY11206.1 |
| SUPFAM:SSF103506 | UniParc:UPI0004EEE262 | UniProt:A0A078FCY5 | MapMan:24.2.13 | : | : |
Description
BnaA03g00420DBnaA03g00420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCY5]
Coordinates
chrLK032010:+:147042..149019
Molecular Weight (calculated)
36826.0 Da
IEP (calculated)
9.974
GRAVY (calculated)
-0.056
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MLITNKIKEE PVTAEARRGA EDLVEMSSSA KTDSKSQASI PPYMKAISGS LGGVVEACCL QPIDVIKTRL QLDRGGAYKG IAHCGSTVVR TEGVRALWKG
101: LTPFATHLTL KYTLRMGSNA MFQNVFKDSE TGKVSNHGRL LSGFGAGVLE ALAIVTPFEV VKIRLQQQKG LSPELFKYKG PIHCARTIVR EESILGLWSG
201: AAPTVMRNGT NQAVMFTAKN SFDVLLWNKH EGDGQALQPW QSMISGFLAG TAGPFCTGPF DVVKTRLMAQ TRDGEGGLKY KGMVHAIRTI YAEEGLVALW
301: RGLLPRLMRI PPGQAIMWAV ADQVTGLYEK RYLLNAPL
101: LTPFATHLTL KYTLRMGSNA MFQNVFKDSE TGKVSNHGRL LSGFGAGVLE ALAIVTPFEV VKIRLQQQKG LSPELFKYKG PIHCARTIVR EESILGLWSG
201: AAPTVMRNGT NQAVMFTAKN SFDVLLWNKH EGDGQALQPW QSMISGFLAG TAGPFCTGPF DVVKTRLMAQ TRDGEGGLKY KGMVHAIRTI YAEEGLVALW
301: RGLLPRLMRI PPGQAIMWAV ADQVTGLYEK RYLLNAPL
001: MATRTESKKQ IPPYMKAVSG SLGGVVEACC LQPIDVIKTR LQLDRVGAYK GIAHCGSKVV RTEGVRALWK GLTPFATHLT LKYTLRMGSN AMFQTAFKDS
101: ETGKVSNRGR FLSGFGAGVL EALAIVTPFE VVKIRLQQQK GLSPELFKYK GPIHCARTIV REESILGLWS GAAPTVMRNG TNQAVMFTAK NAFDILLWNK
201: HEGDGKILQP WQSMISGFLA GTAGPFCTGP FDVVKTRLMA QSRDSEGGIR YKGMVHAIRT IYAEEGLVAL WRGLLPRLMR IPPGQAIMWA VADQVTGLYE
301: MRYLRNAPL
101: ETGKVSNRGR FLSGFGAGVL EALAIVTPFE VVKIRLQQQK GLSPELFKYK GPIHCARTIV REESILGLWS GAAPTVMRNG TNQAVMFTAK NAFDILLWNK
201: HEGDGKILQP WQSMISGFLA GTAGPFCTGP FDVVKTRLMA QSRDSEGGIR YKGMVHAIRT IYAEEGLVAL WRGLLPRLMR IPPGQAIMWA VADQVTGLYE
301: MRYLRNAPL
Arabidopsis Description
SFC1Mitochondrial succinate-fumarate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M038]
SUBAcon: [mitochondrion,plastid,cytosol]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.