Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16814 | Soybean | cytosol | 87.43 | 94.62 |
| VIT_08s0217g00010.t01 | Wine grape | cytosol, mitochondrion, nucleus | 74.27 | 83.01 |
| GSMUA_Achr7P15600_001 | Banana | mitochondrion | 44.74 | 80.53 |
| GSMUA_Achr10P... | Banana | cytosol | 51.46 | 78.57 |
| AT5G01340.1 | Thale cress | cytosol, mitochondrion, plastid | 69.88 | 77.35 |
| Os03t0292200-01 | Rice | peroxisome | 69.88 | 75.39 |
| TraesCS4B01G193900.1 | Wheat | plastid | 69.3 | 73.15 |
| TraesCS4A01G110200.1 | Wheat | plastid | 69.3 | 73.15 |
| CDY11206 | Canola | cytosol | 72.22 | 73.08 |
| TraesCS4D01G194800.1 | Wheat | plastid | 69.01 | 72.39 |
| PGSC0003DMT400028643 | Potato | cytosol, mitochondrion, nucleus | 73.1 | 72.25 |
| EER95032 | Sorghum | plastid | 69.01 | 70.87 |
| HORVU4Hr1G056100.1 | Barley | mitochondrion | 68.71 | 66.76 |
| Zm00001d028753_P003 | Maize | plastid | 69.3 | 64.75 |
| Bra005690.1-P | Field mustard | cytosol | 72.22 | 61.29 |
| CDX80777 | Canola | cytosol | 71.93 | 60.59 |
| KRH47042 | Soybean | cytosol, mitochondrion, plastid | 25.44 | 28.71 |
| KRH44361 | Soybean | cytosol, mitochondrion, plastid | 25.44 | 28.71 |
| KRH39532 | Soybean | cytosol, mitochondrion, plastid | 24.56 | 28.28 |
| KRH74426 | Soybean | cytosol, mitochondrion, vacuole | 23.98 | 27.61 |
| KRH23460 | Soybean | cytosol, mitochondrion, plastid | 23.1 | 26.78 |
| KRH45454 | Soybean | cytosol, mitochondrion, vacuole | 22.81 | 26.26 |
| KRH09864 | Soybean | cytosol, mitochondrion, plastid | 22.51 | 26.19 |
| KRH75622 | Soybean | cytosol, mitochondrion, vacuole | 22.51 | 25.93 |
| KRH62186 | Soybean | cytosol | 22.51 | 25.67 |
| KRG98352 | Soybean | plasma membrane, vacuole | 21.93 | 25.25 |
| KRH46454 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 19.59 | 25.0 |
| KRH52898 | Soybean | cytosol | 9.94 | 25.0 |
| KRH75799 | Soybean | plastid | 22.22 | 24.92 |
| KRH66001 | Soybean | mitochondrion | 22.22 | 24.92 |
| KRH34619 | Soybean | cytosol | 21.93 | 24.59 |
| KRH70113 | Soybean | mitochondrion | 9.65 | 24.09 |
| KRH42853 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 21.05 | 23.92 |
| KRH45564 | Soybean | cytosol | 21.93 | 23.89 |
| KRH58947 | Soybean | cytosol | 14.62 | 23.7 |
| KRH69658 | Soybean | cytosol | 21.93 | 23.66 |
| KRH74503 | Soybean | cytosol | 21.93 | 23.66 |
| KRH49267 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 21.05 | 23.61 |
| KRG92168 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 21.05 | 23.61 |
| KRH71523 | Soybean | plastid | 21.64 | 23.34 |
| KRH00136 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 21.34 | 22.05 |
| KRH50090 | Soybean | cytosol | 19.3 | 21.64 |
| KRH20413 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 16.67 | 20.73 |
| KRH62946 | Soybean | extracellular | 5.56 | 17.59 |
| KRH65469 | Soybean | extracellular | 6.43 | 17.46 |
Protein Annotations
| Gene3D:1.50.40.10 | EntrezGene:100807301 | MapMan:24.2.13 | UniProt:A0A0R0L6R1 | EMBL:ACUP02001211 | EnsemblPlantsGene:GLYMA_02G211700 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR018108 |
| InterPro:IPR023395 | EnsemblPlants:KRH72424 | ProteinID:KRH72424 | ProteinID:KRH72424.1 | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf |
| PFAM:PF00153 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF396 | SUPFAM:SSF103506 | UniParc:UPI0006EDA954 |
Description
hypothetical protein
Coordinates
chr2:-:39685735..39693586
Molecular Weight (calculated)
37592.3 Da
IEP (calculated)
10.082
GRAVY (calculated)
-0.013
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MPFTTYCLEG EQIKSPSIMK QDVAQDNTNS YSKNSIPPYM KAISGSLGGI MEASCLQPID VIKTRLQLDR SGNYKGILHC GATISRTEGV RALWKGLTPF
101: ATHLTLKYAL RMGSNAVLQS AFKDPETGKL SGYGRILSGF GAGVLEAIII VTPFEVVKIR LQQQRGLSPE LLKYKGPVHC ARMIIREEGF RGLWAGVAPT
201: VMRNGTNQSA MFTAKNAFDV LLWKKHEGDG RVLLPWQSMI SGFLAGTAGP ICTGPFDVVK TRLMAQTREG GGVLKYKGMI HAIRTIYVEE GLLALWKGLL
301: PRLMRIPPGQ AIMWGVADQI IGLYERRLHA CWVVDSSTNH IP
101: ATHLTLKYAL RMGSNAVLQS AFKDPETGKL SGYGRILSGF GAGVLEAIII VTPFEVVKIR LQQQRGLSPE LLKYKGPVHC ARMIIREEGF RGLWAGVAPT
201: VMRNGTNQSA MFTAKNAFDV LLWKKHEGDG RVLLPWQSMI SGFLAGTAGP ICTGPFDVVK TRLMAQTREG GGVLKYKGMI HAIRTIYVEE GLLALWKGLL
301: PRLMRIPPGQ AIMWGVADQI IGLYERRLHA CWVVDSSTNH IP
001: MATRTESKKQ IPPYMKAVSG SLGGVVEACC LQPIDVIKTR LQLDRVGAYK GIAHCGSKVV RTEGVRALWK GLTPFATHLT LKYTLRMGSN AMFQTAFKDS
101: ETGKVSNRGR FLSGFGAGVL EALAIVTPFE VVKIRLQQQK GLSPELFKYK GPIHCARTIV REESILGLWS GAAPTVMRNG TNQAVMFTAK NAFDILLWNK
201: HEGDGKILQP WQSMISGFLA GTAGPFCTGP FDVVKTRLMA QSRDSEGGIR YKGMVHAIRT IYAEEGLVAL WRGLLPRLMR IPPGQAIMWA VADQVTGLYE
301: MRYLRNAPL
101: ETGKVSNRGR FLSGFGAGVL EALAIVTPFE VVKIRLQQQK GLSPELFKYK GPIHCARTIV REESILGLWS GAAPTVMRNG TNQAVMFTAK NAFDILLWNK
201: HEGDGKILQP WQSMISGFLA GTAGPFCTGP FDVVKTRLMA QSRDSEGGIR YKGMVHAIRT IYAEEGLVAL WRGLLPRLMR IPPGQAIMWA VADQVTGLYE
301: MRYLRNAPL
Arabidopsis Description
SFC1Mitochondrial succinate-fumarate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M038]
SUBAcon: [mitochondrion,plastid,cytosol]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.