Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11206 | Canola | cytosol | 77.59 | 93.2 |
| AT5G01340.1 | Thale cress | cytosol, mitochondrion, plastid | 70.69 | 92.88 |
| VIT_08s0217g00010.t01 | Wine grape | cytosol, mitochondrion, nucleus | 61.58 | 81.7 |
| GSMUA_Achr7P15600_001 | Banana | mitochondrion | 38.18 | 81.58 |
| KRH16814 | Soybean | cytosol | 61.58 | 79.11 |
| Os03t0292200-01 | Rice | peroxisome | 60.34 | 77.29 |
| GSMUA_Achr10P... | Banana | cytosol | 42.36 | 76.79 |
| TraesCS4B01G193900.1 | Wheat | plastid | 59.85 | 75.0 |
| TraesCS4A01G110200.1 | Wheat | plastid | 59.85 | 75.0 |
| TraesCS4D01G194800.1 | Wheat | plastid | 60.1 | 74.85 |
| EER95032 | Sorghum | plastid | 59.36 | 72.37 |
| KRH72424 | Soybean | cytosol | 60.59 | 71.93 |
| PGSC0003DMT400028643 | Potato | cytosol, mitochondrion, nucleus | 61.08 | 71.68 |
| HORVU4Hr1G056100.1 | Barley | mitochondrion | 60.1 | 69.32 |
| Zm00001d028753_P003 | Maize | plastid | 59.36 | 65.85 |
| CDY03190 | Canola | cytosol, mitochondrion, plastid | 19.46 | 26.33 |
| CDY35182 | Canola | cytosol, mitochondrion, plastid | 19.21 | 26.0 |
| CDX87675 | Canola | cytosol, mitochondrion, plastid | 18.97 | 25.84 |
| CDY13754 | Canola | cytosol | 19.95 | 25.71 |
| CDX76916 | Canola | cytosol | 19.95 | 25.71 |
| CDY37150 | Canola | cytosol, mitochondrion, plastid | 18.97 | 25.67 |
| CDX89481 | Canola | cytosol | 19.95 | 25.55 |
| CDY25603 | Canola | cytosol | 19.95 | 25.55 |
| CDY58507 | Canola | cytosol, mitochondrion, plastid | 18.72 | 25.33 |
| CDX77693 | Canola | cytosol, mitochondrion, plastid | 18.47 | 25.0 |
| CDY22103 | Canola | cytosol, endoplasmic reticulum, peroxisome, plastid | 18.97 | 24.52 |
| CDX97299 | Canola | extracellular | 15.02 | 24.5 |
| CDX91241 | Canola | cytosol | 17.49 | 24.48 |
| CDY21942 | Canola | plastid | 18.97 | 24.44 |
| CDY03439 | Canola | cytosol, plasma membrane, plastid | 18.97 | 24.44 |
| CDY34292 | Canola | cytosol, plasma membrane, plastid | 18.97 | 24.44 |
| CDY58780 | Canola | cytosol, mitochondrion, plastid | 18.47 | 24.04 |
| CDX87281 | Canola | cytosol, mitochondrion, plastid | 18.47 | 24.04 |
| CDX88877 | Canola | cytosol | 17.49 | 23.75 |
| CDX67588 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 17.73 | 23.68 |
| CDY51585 | Canola | plasma membrane | 17.73 | 23.68 |
| CDX73508 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 17.73 | 23.61 |
| CDX78208 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 17.73 | 23.61 |
| CDY13183 | Canola | plasma membrane | 16.26 | 23.49 |
| CDY44940 | Canola | cytosol | 17.0 | 23.08 |
| CDX76170 | Canola | cytosol, peroxisome, plastid | 17.24 | 22.95 |
| CDY35862 | Canola | cytosol | 16.75 | 22.74 |
| CDY42293 | Canola | cytosol | 16.75 | 22.74 |
| CDX92503 | Canola | cytosol | 16.75 | 22.74 |
| CDX97871 | Canola | cytosol | 6.16 | 22.73 |
| CDX81127 | Canola | plasma membrane | 18.23 | 22.09 |
| CDY67400 | Canola | plasma membrane | 18.23 | 22.09 |
| CDY33772 | Canola | mitochondrion | 16.75 | 22.08 |
| CDY57210 | Canola | cytosol, peroxisome, plastid | 16.5 | 22.04 |
| CDY32672 | Canola | plasma membrane | 16.26 | 21.85 |
| CDY37683 | Canola | cytosol, peroxisome, plastid | 16.26 | 21.71 |
| CDX80317 | Canola | endoplasmic reticulum, plasma membrane | 16.26 | 21.64 |
| CDY02849 | Canola | plasma membrane | 16.01 | 21.52 |
| CDX70888 | Canola | cytosol, extracellular, plastid | 13.3 | 21.18 |
| CDY27701 | Canola | cytosol | 17.49 | 20.88 |
| CDY55007 | Canola | cytosol, peroxisome, plasma membrane | 17.0 | 18.9 |
| CDX91242 | Canola | extracellular | 0.25 | 5.26 |
Protein Annotations
| EnsemblPlants:CDX80777 | EnsemblPlantsGene:GSBRNA2T00134150001 | Gene3D:1.50.40.10 | GO:A0A078CVJ5 | InterPro:IPR018108 | InterPro:IPR023395 |
| InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | ncoils:Coil | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF396 | PFAM:PF00153 |
| PFscan:PS50920 | ProteinID:CDX80777 | ProteinID:CDX80777.1 | SUPFAM:SSF103506 | UniParc:UPI0004EDE5ED | MapMan:24.2.13 |
Description
BnaC03g00310D
Coordinates
chrLK031823:+:158915..162168
Molecular Weight (calculated)
44196.8 Da
IEP (calculated)
10.080
GRAVY (calculated)
-0.050
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGGNFIGR VISYVANELI VNGLSNSHAF QRFAVRTSKR IENISKMAAE SKEKVAQHME ELSKNSDVNK HITHSNVTIL SSLSLSAEDL VEMAAAPART
101: DSKSQASIPP YMKAISGSLG GVVEACCLQP IDVIKTRLQL DRGGAYKGIA HCGSTVVRTE GVRALWKGLT PFATHLTLKY TLRMGSNAMF QTVFKDSETG
201: KVSNHGRLLS GFGAGVLEAL AIVTPFEVVK IRLQQQKGLS PELFKYKGPI HCARTIVREE SFLGLWSGAA PTVMRNGTNQ AVMFTAKNSF DVLLWNKHEG
301: DGQALQPWQS MISGFLAGTA GPFCTGPFDV VKTRLMAQTR DGEGGLKYRG MVHAIRTIYA EEGLVALWRG LLPRLMRIPP GQAIMWAVAD QVTGLYEKRY
401: LLNAPL
101: DSKSQASIPP YMKAISGSLG GVVEACCLQP IDVIKTRLQL DRGGAYKGIA HCGSTVVRTE GVRALWKGLT PFATHLTLKY TLRMGSNAMF QTVFKDSETG
201: KVSNHGRLLS GFGAGVLEAL AIVTPFEVVK IRLQQQKGLS PELFKYKGPI HCARTIVREE SFLGLWSGAA PTVMRNGTNQ AVMFTAKNSF DVLLWNKHEG
301: DGQALQPWQS MISGFLAGTA GPFCTGPFDV VKTRLMAQTR DGEGGLKYRG MVHAIRTIYA EEGLVALWRG LLPRLMRIPP GQAIMWAVAD QVTGLYEKRY
401: LLNAPL
001: MATRTESKKQ IPPYMKAVSG SLGGVVEACC LQPIDVIKTR LQLDRVGAYK GIAHCGSKVV RTEGVRALWK GLTPFATHLT LKYTLRMGSN AMFQTAFKDS
101: ETGKVSNRGR FLSGFGAGVL EALAIVTPFE VVKIRLQQQK GLSPELFKYK GPIHCARTIV REESILGLWS GAAPTVMRNG TNQAVMFTAK NAFDILLWNK
201: HEGDGKILQP WQSMISGFLA GTAGPFCTGP FDVVKTRLMA QSRDSEGGIR YKGMVHAIRT IYAEEGLVAL WRGLLPRLMR IPPGQAIMWA VADQVTGLYE
301: MRYLRNAPL
101: ETGKVSNRGR FLSGFGAGVL EALAIVTPFE VVKIRLQQQK GLSPELFKYK GPIHCARTIV REESILGLWS GAAPTVMRNG TNQAVMFTAK NAFDILLWNK
201: HEGDGKILQP WQSMISGFLA GTAGPFCTGP FDVVKTRLMA QSRDSEGGIR YKGMVHAIRT IYAEEGLVAL WRGLLPRLMR IPPGQAIMWA VADQVTGLYE
301: MRYLRNAPL
Arabidopsis Description
SFC1Mitochondrial succinate-fumarate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M038]
SUBAcon: [mitochondrion,plastid,cytosol]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.