CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
plastid 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	cytosol
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22103	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	96.19	96.5
CDX91242	Canola	extracellular	5.71	94.74
CDX91241	Canola	cytosol	75.56	82.07
AT4G03115.3	Thale cress	cytosol	88.25	80.35
CDX97299	Canola	extracellular	58.73	74.3
KRH71523	Soybean	plastid	67.3	66.88
VIT_07s0104g01160.t01	Wine grape	cytosol	64.76	65.59
TraesCS5D01G109300.2	Wheat	plastid	60.0	63.64
KXG23597	Sorghum	mitochondrion	58.1	61.41
HORVU5Hr1G026160.2	Barley	mitochondrion, plastid	58.41	61.13
Solyc09g074370.2.1	Tomato	cytosol	55.24	61.05
Zm00001d023895_P007	Maize	mitochondrion	57.14	60.4
GSMUA_Achr1P14700_001	Banana	cytosol	60.95	55.33
Os12t0533800-01	Rice	endoplasmic reticulum, extracellular	39.37	53.68
PGSC0003DMT400043390	Potato	cytosol, plastid	65.4	49.4
TraesCS5A01G096600.1	Wheat	mitochondrion, plastid	40.63	42.24
TraesCS5B01G102500.1	Wheat	mitochondrion	40.32	41.78
CDX97871	Canola	cytosol	11.75	33.64
CDY34292	Canola	cytosol, plasma membrane, plastid	30.79	30.79
CDY13183	Canola	plasma membrane	27.3	30.61
CDX89481	Canola	cytosol	30.79	30.6
CDY03439	Canola	cytosol, plasma membrane, plastid	30.48	30.48
CDY25603	Canola	cytosol	30.48	30.28
CDY13754	Canola	cytosol	30.16	30.16
CDY02849	Canola	plasma membrane	28.89	30.13
CDY51585	Canola	plasma membrane	28.89	29.93
CDX67588	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	28.89	29.93
CDX76916	Canola	cytosol	29.84	29.84
CDY32672	Canola	plasma membrane	28.57	29.8
CDY67400	Canola	plasma membrane	31.11	29.25
CDX81127	Canola	plasma membrane	31.11	29.25
CDX78208	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	28.25	29.18
CDX76170	Canola	cytosol, peroxisome, plastid	28.25	29.18
CDX73508	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	28.25	29.18
CDX80317	Canola	endoplasmic reticulum, plasma membrane	27.94	28.85
CDY33772	Canola	mitochondrion	27.94	28.57
CDX88877	Canola	cytosol	25.4	26.76
CDY35862	Canola	cytosol	25.08	26.42
CDY42293	Canola	cytosol	25.08	26.42
CDY44940	Canola	cytosol	25.08	26.42
CDX92503	Canola	cytosol	25.08	26.42
CDY27701	Canola	cytosol	27.3	25.29
CDY55007	Canola	cytosol, peroxisome, plasma membrane	28.25	24.38
CDX70888	Canola	cytosol, extracellular, plastid	19.05	23.53
CDY58507	Canola	cytosol, mitochondrion, plastid	22.22	23.33
CDY35182	Canola	cytosol, mitochondrion, plastid	22.22	23.33
CDY03190	Canola	cytosol, mitochondrion, plastid	22.22	23.33
CDX87675	Canola	cytosol, mitochondrion, plastid	21.9	23.15
CDY58780	Canola	cytosol, mitochondrion, plastid	22.86	23.08
CDX87281	Canola	cytosol, mitochondrion, plastid	22.86	23.08
CDX77693	Canola	cytosol, mitochondrion, plastid	21.9	23.0
CDY37150	Canola	cytosol, mitochondrion, plastid	21.9	23.0
CDY11206	Canola	cytosol	24.44	22.78
CDX80777	Canola	cytosol	24.44	18.97
CDY37683	Canola	cytosol, peroxisome, plastid	16.51	17.11
CDY57210	Canola	cytosol, peroxisome, plastid	15.87	16.45

Protein Annotations

EnsemblPlants:CDY21942	EnsemblPlantsGene:GSBRNA2T00018271001	Gene3D:1.50.40.10	GO:A0A078GAA6	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF664	PFAM:PF00153	PFscan:PS50920	ProteinID:CDY21942	ProteinID:CDY21942.1	SEG:seg
SUPFAM:SSF103506	UniParc:UPI0004EDD262	UniProt:A0A078GAA6	MapMan:24.2.13	:	:

Description

BnaC09g00480DBnaC09g00480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAA6]

Coordinates

chrLK032126:-:246829..249574

Molecular Weight (calculated)

33808.1 Da

IEP (calculated)

10.376

GRAVY (calculated)

0.299

Length

315 amino acids

Sequence
(BLAST)

001: MIGDISPPVA SIPVVVEGNA QAMNPKNLLP PLSTVATHFG TSGLSVALAT GVTHPLDVLK VRLQMQHVGQ RGPLLGMTGI FLQLMKQEGP RSLYLGLTPA
101: LTRSVLYGGL RLGLYEPTKV CFDWAFESTN VLVKIASGAF AGAVSTALTN PVEVVKIRLQ MNPNAVPIAE VREMVSKEGI GALWKGVGPA MVRAAALTAS
201: QLATYDETKR ILVKRSSLEE GFQLHLCSSV VAGVVSTLIT APIDMIKTRV MLQQNSGSVR IYRNGFHCGY KVIRKEGPLA LYKGGFAIFA RLGPQTMITF
301: ILCEKLRSLA GLHKM

Best Arabidopsis Sequence Match ( AT4G03115.1 )
(BLAST)

001: MIGDISPPVT SIPVVEGNEE LRKPQNLIPP FSKVVSHFGI SGISVALATG VTHPLDVVKV RLQMQHVGQR GPLIGMTGIF LQLMKNEGRR SLYLGLTPAL
101: TRSVLYGGLR LGLYEPTKVS FDWAFGSTNV LVKIASGAFA GAFSTALTNP VEVVKVRLQM NPNAVPIAEV REIVSKEGIG ALWKGVGPAM VRAAALTASQ
201: LATYDEAKRI LVKRTSLEEG FHLHLCSSVV AGLVSTLITA PMDMIKTRLM LQQGSESTKT YRNGFHCGYK VVRKEGPLAL YKGGFAIFAR LGPQTMITFI
301: LCEKLRSLAG LHTM

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT4G03115]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.