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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, plastid
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX87281 Canola cytosol, mitochondrion, plastid 99.04 99.04
AT1G79900.1 Thale cress cytosol 84.29 88.85
KRH09864 Soybean cytosol, mitochondrion, plastid 66.67 70.75
KRH47042 Soybean cytosol, mitochondrion, plastid 68.59 70.63
KRH23460 Soybean cytosol, mitochondrion, plastid 66.67 70.51
Solyc06g066680.2.1 Tomato cytosol 69.87 69.21
PGSC0003DMT400042642 Potato cytosol 69.23 68.57
VIT_09s0002g04500.t01 Wine grape cytosol, mitochondrion, plastid 68.27 68.49
KRH44361 Soybean cytosol, mitochondrion, plastid 66.35 68.32
GSMUA_Achr10P... Banana cytosol, mitochondrion, plastid 65.38 65.81
Os01t0225000-00 Rice cytosol 64.1 62.11
GSMUA_Achr6P14120_001 Banana cytosol, endoplasmic reticulum, mitochondrion 64.1 61.92
TraesCS3A01G149900.1 Wheat cytosol 64.1 61.73
TraesCS3B01G177000.1 Wheat cytosol 63.78 61.42
TraesCS3D01G157800.1 Wheat cytosol 63.14 60.8
Zm00001d008974_P001 Maize cytosol 62.5 58.21
KXG31527 Sorghum cytosol, nucleus, peroxisome 63.78 56.21
CDY03190 Canola cytosol, mitochondrion, plastid 33.01 34.33
CDY58507 Canola cytosol, mitochondrion, plastid 32.69 34.0
CDY35182 Canola cytosol, mitochondrion, plastid 32.69 34.0
CDX87675 Canola cytosol, mitochondrion, plastid 32.37 33.89
CDY37150 Canola cytosol, mitochondrion, plastid 32.37 33.67
CDX77693 Canola cytosol, mitochondrion, plastid 32.37 33.67
CDX91242 Canola extracellular 1.6 26.32
CDY57210 Canola cytosol, peroxisome, plastid 24.68 25.33
CDY37683 Canola cytosol, peroxisome, plastid 24.68 25.33
CDX97299 Canola extracellular 18.91 23.69
CDY22103 Canola cytosol, endoplasmic reticulum, peroxisome, plastid 23.08 22.93
CDY21942 Canola plastid 23.08 22.86
CDX91241 Canola cytosol 20.83 22.41
CDY11206 Canola cytosol 24.04 22.19
CDY34292 Canola cytosol, plasma membrane, plastid 22.12 21.9
CDY13183 Canola plasma membrane 19.55 21.71
CDY03439 Canola cytosol, plasma membrane, plastid 21.79 21.59
CDX81127 Canola plasma membrane 23.08 21.49
CDY67400 Canola plasma membrane 23.08 21.49
CDX78208 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 20.51 20.98
CDX73508 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 20.51 20.98
CDX76916 Canola cytosol 21.15 20.95
CDY32672 Canola plasma membrane 20.19 20.86
CDY02849 Canola plasma membrane 20.19 20.86
CDX67588 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 20.19 20.72
CDY51585 Canola plasma membrane 20.19 20.72
CDX80317 Canola endoplasmic reticulum, plasma membrane 20.19 20.66
CDY13754 Canola cytosol 20.83 20.63
CDY25603 Canola cytosol 20.83 20.5
CDX89481 Canola cytosol 20.83 20.5
CDX76170 Canola cytosol, peroxisome, plastid 19.87 20.33
CDY33772 Canola mitochondrion 19.23 19.48
CDX97871 Canola cytosol 6.73 19.09
CDX80777 Canola cytosol 24.04 18.47
CDX88877 Canola cytosol 17.63 18.39
CDY42293 Canola cytosol 17.31 18.06
CDY35862 Canola cytosol 17.31 18.06
CDX92503 Canola cytosol 17.31 18.06
CDY44940 Canola cytosol 17.31 18.06
CDY27701 Canola cytosol 19.55 17.94
CDY55007 Canola cytosol, peroxisome, plasma membrane 20.51 17.53
CDX70888 Canola cytosol, extracellular, plastid 13.14 16.08
Protein Annotations
Gene3D:1.50.40.10MapMan:24.2.13GO:A0A078J6U7UniProt:A0A078J6U7EnsemblPlants:CDY58780ProteinID:CDY58780
ProteinID:CDY58780.1GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00025136001InterPro:IPR018108InterPro:IPR023395InterPro:Mit_carrierInterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sfPFAM:PF00153PRINTS:PR00926PFscan:PS50920PANTHER:PTHR24089PANTHER:PTHR24089:SF70
SUPFAM:SSF103506UniParc:UPI0004EB2473SEG:seg:::
Description
BnaCnng33810DBnaCnng33810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6U7]
Coordinates
chrLK033698:+:40976..42382
Molecular Weight (calculated)
33994.3 Da
IEP (calculated)
9.689
GRAVY (calculated)
0.093
Length
312 amino acids
Sequence
(BLAST)
001: MDFWPEFMAS SWGREFVAGG FGGVAGIISG YPLDTLRIRQ QQSSKSGSAF TILRRMLAVE GPSSLYRGMA APLASVTFQN AMVFQIYAIL SRSFDSSVPM
101: EEPSSYRGVA LGGVGTGAVQ SLLLSPVELI KIRLQLQQSN SGPISLAKTI LRREGLKGIY KGLTITVLRD APAHGFYFWT YEYVREMLHP GCRKSGEETL
201: RTMLVAGGLA GVSSWVICYP LDVVKTRLQQ GGHGAYEGIA DCFRKSIAQE GYGVLWRGLG TAVARAFVVN GAIFAAYEVA LRCLFTQLTS ADVVTRDLSK
301: KPKEDALKIH KE
Best Arabidopsis Sequence Match ( AT1G79900.1 )
(BLAST)
001: MDFWPEFMAT SWGREFVAGG FGGVAGIISG YPLDTLRIRQ QQSSKSGSAF SILRRMLAIE GPSSLYRGMA APLASVTFQN AMVFQIYAIF SRSFDSSVPL
101: VEPPSYRGVA LGGVATGAVQ SLLLTPVELI KIRLQLQQTK SGPITLAKSI LRRQGLQGLY RGLTITVLRD APAHGLYFWT YEYVRERLHP GCRKTGQENL
201: RTMLVAGGLA GVASWVACYP LDVVKTRLQQ GHGAYEGIAD CFRKSVKQEG YTVLWRGLGT AVARAFVVNG AIFAAYEVAL RCLFNQSPSP DIVTGD
Arabidopsis Description
BAC2Mitochondrial arginine transporter BAC2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA93]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.