Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008974_P001 | Maize | cytosol | 83.62 | 88.36 |
| Os01t0225000-00 | Rice | cytosol | 75.71 | 83.23 |
| TraesCS3B01G177000.1 | Wheat | cytosol | 74.86 | 81.79 |
| TraesCS3A01G149900.1 | Wheat | cytosol | 74.86 | 81.79 |
| TraesCS3D01G157800.1 | Wheat | cytosol | 74.01 | 80.86 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 62.15 | 70.97 |
| GSMUA_Achr6P14120_001 | Banana | cytosol, endoplasmic reticulum, mitochondrion | 63.28 | 69.35 |
| AT1G79900.1 | Thale cress | cytosol | 57.34 | 68.58 |
| KRH23460 | Soybean | cytosol, mitochondrion, plastid | 53.67 | 64.41 |
| VIT_09s0002g04500.t01 | Wine grape | cytosol, mitochondrion, plastid | 56.5 | 64.31 |
| Bra035205.1-P | Field mustard | cytosol, mitochondrion, plastid | 56.5 | 64.1 |
| CDX87281 | Canola | cytosol, mitochondrion, plastid | 56.5 | 64.1 |
| CDY58780 | Canola | cytosol, mitochondrion, plastid | 56.21 | 63.78 |
| KRH09864 | Soybean | cytosol, mitochondrion, plastid | 52.82 | 63.61 |
| Solyc06g066680.2.1 | Tomato | cytosol | 55.37 | 62.22 |
| PGSC0003DMT400042642 | Potato | cytosol | 55.08 | 61.9 |
| KRH47042 | Soybean | cytosol, mitochondrion, plastid | 52.82 | 61.72 |
| PGSC0003DMT400014293 | Potato | cytosol, mitochondrion, plastid | 51.41 | 61.49 |
| KRH44361 | Soybean | cytosol, mitochondrion, plastid | 50.28 | 58.75 |
| Solyc03g120100.2.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion | 49.44 | 58.33 |
| EER91889 | Sorghum | cytosol | 29.38 | 35.14 |
| KXG38173 | Sorghum | cytosol, extracellular, mitochondrion | 25.99 | 30.07 |
| KXG23597 | Sorghum | mitochondrion | 20.06 | 23.83 |
| EER95032 | Sorghum | plastid | 21.75 | 23.12 |
| KXG26414 | Sorghum | plastid | 19.49 | 23.0 |
| EES15143 | Sorghum | cytosol | 20.62 | 22.19 |
| KXG25746 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 18.08 | 21.69 |
| OQU84127 | Sorghum | golgi, plasma membrane, plastid | 18.93 | 17.59 |
| EES17872 | Sorghum | cytosol, extracellular, peroxisome, plastid | 14.97 | 17.21 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | UniProt:A0A1B6Q0S2 | GO:GO:0000064 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005290 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0006561 | GO:GO:0006810 | GO:GO:0006950 | GO:GO:0006972 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0015181 | GO:GO:0015189 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0043091 | GO:GO:0055085 | GO:GO:0089709 | GO:GO:1903352 | GO:GO:1903401 |
| GO:GO:1903826 | InterPro:IPR018108 | InterPro:IPR023395 | EnsemblPlants:KXG31527 | ProteinID:KXG31527 | ProteinID:KXG31527.1 |
| InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PFAM:PF00153 | PRINTS:PR00926 | PFscan:PS50920 |
| PANTHER:PTHR24089 | PANTHER:PTHR24089:SF438 | EnsemblPlantsGene:SORBI_3003G012300 | SUPFAM:SSF103506 | UniParc:UPI00081AC657 | SEG:seg |
Description
hypothetical protein
Coordinates
chr3:+:1069835..1073211
Molecular Weight (calculated)
37746.5 Da
IEP (calculated)
9.753
GRAVY (calculated)
-0.058
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAAAPTGTY SDESSTGRSM EFWPEFLATS GGREFVAGGV GGMAGVLAGH PLDTLRIRLQ QPPAASPRVG LAPAHAPRRR DTPHPSAVRL LCGILHAEGP
101: SALYRGMAAP LASVAFQNAM VFQVYAILSR SLDPESSATS EPPSYASVAL AGVGTGALQT LILSPVELVK IRLQLEAAGH GRPGHHHRRR GPVEMARDIL
201: RREGLRGVYR GLTVTALRDA PAHGVYFWTY ERARERMHPG CRRQGADGDG DEGLGTMLVS GGLAGVASWV CCYPLDVVKS RLQAQGMGAT PRYRGVVDCF
301: RRSVREEGLP VLWRGLGTAV ARAFVVNGAI FSAYELALRF LASGSGPRLV MEEN
101: SALYRGMAAP LASVAFQNAM VFQVYAILSR SLDPESSATS EPPSYASVAL AGVGTGALQT LILSPVELVK IRLQLEAAGH GRPGHHHRRR GPVEMARDIL
201: RREGLRGVYR GLTVTALRDA PAHGVYFWTY ERARERMHPG CRRQGADGDG DEGLGTMLVS GGLAGVASWV CCYPLDVVKS RLQAQGMGAT PRYRGVVDCF
301: RRSVREEGLP VLWRGLGTAV ARAFVVNGAI FSAYELALRF LASGSGPRLV MEEN
001: MDFWPEFMAT SWGREFVAGG FGGVAGIISG YPLDTLRIRQ QQSSKSGSAF SILRRMLAIE GPSSLYRGMA APLASVTFQN AMVFQIYAIF SRSFDSSVPL
101: VEPPSYRGVA LGGVATGAVQ SLLLTPVELI KIRLQLQQTK SGPITLAKSI LRRQGLQGLY RGLTITVLRD APAHGLYFWT YEYVRERLHP GCRKTGQENL
201: RTMLVAGGLA GVASWVACYP LDVVKTRLQQ GHGAYEGIAD CFRKSVKQEG YTVLWRGLGT AVARAFVVNG AIFAAYEVAL RCLFNQSPSP DIVTGD
101: VEPPSYRGVA LGGVATGAVQ SLLLTPVELI KIRLQLQQTK SGPITLAKSI LRRQGLQGLY RGLTITVLRD APAHGLYFWT YEYVRERLHP GCRKTGQENL
201: RTMLVAGGLA GVASWVACYP LDVVKTRLQQ GHGAYEGIAD CFRKSVKQEG YTVLWRGLGT AVARAFVVNG AIFAAYEVAL RCLFNQSPSP DIVTGD
Arabidopsis Description
BAC2Mitochondrial arginine transporter BAC2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA93]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.