CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048583_P001	Maize	mitochondrion	79.53	97.74
Os11t0707800-01	Rice	mitochondrion	73.75	93.36
TraesCS4A01G179400.1	Wheat	cytosol	72.7	91.12
TraesCS4D01G134300.1	Wheat	golgi	72.7	91.12
TraesCS4B01G139600.1	Wheat	cytosol	72.44	90.79
HORVU4Hr1G027150.1	Barley	cytosol, plasma membrane, plastid	77.95	74.25
KXG25746	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	54.86	70.85
EES15143	Sorghum	cytosol	30.97	35.87
KXG26414	Sorghum	plastid	26.77	34.0
EES17872	Sorghum	cytosol, extracellular, peroxisome, plastid	23.88	29.55
KXG23597	Sorghum	mitochondrion	23.1	29.53
EER91889	Sorghum	cytosol	18.64	23.99
EER95032	Sorghum	plastid	19.95	22.82
KXG38173	Sorghum	cytosol, extracellular, mitochondrion	16.01	19.93
KXG31527	Sorghum	cytosol, nucleus, peroxisome	17.59	18.93

Protein Annotations

Gene3D:1.50.40.10	MapMan:2.4.2.3	MapMan:24.2.13	EntrezGene:8086044	UniProt:A0A1Z5RKE0	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006810	GO:GO:0006839
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0031966	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mit_uncoupling_UCP-like	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	EnsemblPlants:OQU84127	ProteinID:OQU84127	ProteinID:OQU84127.1
PFAM:PF00153	PRINTS:PR00784	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF622	EnsemblPlantsGene:SORBI_3005G231900
SUPFAM:SSF103506	SignalP:SignalP-noTM	UniParc:UPI0001A86884	RefSeq:XP_002450079.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:+:71821468..71825208

Molecular Weight (calculated)

40258.4 Da

IEP (calculated)

10.103

GRAVY (calculated)

0.267

Length

381 amino acids

Sequence
(BLAST)

001: MISVRVCIRS PISPLLCLCF FFFSPAPPAR RPACLVLLAA GCGSHSTPLH PPVRLFASPS SGSSRPHPAA AMPGDHGSKV DISFAGRFTA SAIAACFAEI
101: CTIPLDTAKV RLQLQKNVVA AAAAGDAAPA LPKYRGLLGT AATIAREEGA AALWKGIVPG LHRQCIYGGL RIGLYEPVKS FYVGKDHVGD VPLSKKVAAG
201: FTTGAIAISI ANPTDLVKVR LQAEGKLAPG VPRRYTGAMD AYSKIARQEG VAALWTGLGP NVARNAIINA AELASYDQVK QTILKLPGFK DDVVTHLFAG
301: LGAGFFAVCV GSPVDVVKSR MMGDSAYKST LDCFVKTLKN DGPLAFYKGF LPNFARLGSW NVIMFLTLEQ VQKMFVRKPA S

Best Arabidopsis Sequence Match ( AT3G54110.1 )
(BLAST)

001: MVAAGKSDLS LPKTFACSAF AACVGEVCTI PLDTAKVRLQ LQKSALAGDV TLPKYRGLLG TVGTIAREEG LRSLWKGVVP GLHRQCLFGG LRIGMYEPVK
101: NLYVGKDFVG DVPLSKKILA GLTTGALGIM VANPTDLVKV RLQAEGKLAA GAPRRYSGAL NAYSTIVRQE GVRALWTGLG PNVARNAIIN AAELASYDQV
201: KETILKIPGF TDNVVTHILS GLGAGFFAVC IGSPVDVVKS RMMGDSGAYK GTIDCFVKTL KSDGPMAFYK GFIPNFGRLG SWNVIMFLTL EQAKKYVREL
301: DASKRN

Arabidopsis Description

PUMP1UCP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V8U1]
SUBAcon: [plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.