CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0573800-01	Rice	cytosol	91.22	91.22
TraesCS1D01G195500.1	Wheat	golgi	89.19	89.19
TraesCS1B01G206900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	89.19	89.19
TraesCS1A01G191900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	89.19	89.19
KRH74426	Soybean	cytosol, mitochondrion, vacuole	80.74	80.47
KRH39532	Soybean	cytosol, mitochondrion, plastid	79.73	79.46
GSMUA_Achr5P13930_001	Banana	cytosol	78.72	78.72
GSMUA_Achr5P03430_001	Banana	cytosol, mitochondrion, plastid	78.38	78.38
KRH75622	Soybean	cytosol, mitochondrion, vacuole	77.7	77.44
KRH45454	Soybean	cytosol, mitochondrion, vacuole	77.36	77.1
Solyc10g079200.1.1	Tomato	plastid	77.03	76.77
PGSC0003DMT400005377	Potato	cytosol	75.34	76.11
GSMUA_Achr4P16910_001	Banana	cytosol, mitochondrion, plastid	76.69	75.42
AT5G46800.2	Thale cress	cytosol	76.35	75.33
PGSC0003DMT400021041	Potato	cytosol, mitochondrion, plastid	75.34	75.08
CDX87675	Canola	cytosol, mitochondrion, plastid	74.66	74.16
Bra022065.1-P	Field mustard	cytosol, mitochondrion, plastid	74.66	74.16
CDY37150	Canola	cytosol, mitochondrion, plastid	74.66	73.67
Solyc06g061170.2.1	Tomato	plastid	56.76	73.36
Bra017524.1-P	Field mustard	cytosol, mitochondrion, plastid	74.32	73.33
CDY35182	Canola	cytosol, mitochondrion, plastid	74.32	73.33
CDY03190	Canola	cytosol, mitochondrion, plastid	73.99	73.0
CDY58507	Canola	cytosol, mitochondrion, plastid	71.96	71.0
PGSC0003DMT400019719	Potato	cytosol	20.61	70.93
CDX77693	Canola	cytosol, mitochondrion, plastid	71.62	70.67
Bra024994.1-P	Field mustard	cytosol, mitochondrion, plastid	71.62	70.67
VIT_02s0012g01250.t01	Wine grape	mitochondrion, plastid	80.07	69.3
KXG38173	Sorghum	cytosol, extracellular, mitochondrion	34.12	33.01
KXG31527	Sorghum	cytosol, nucleus, peroxisome	35.14	29.38
KXG23597	Sorghum	mitochondrion	24.32	24.16
KXG25746	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	22.97	23.05
EER95032	Sorghum	plastid	25.34	22.52
KXG26414	Sorghum	plastid	22.3	22.0
EES17872	Sorghum	cytosol, extracellular, peroxisome, plastid	22.64	21.75
EES15143	Sorghum	cytosol	23.31	20.97
OQU84127	Sorghum	golgi, plasma membrane, plastid	23.99	18.64

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EntrezGene:8055150	UniProt:C5WRC1	EnsemblPlants:EER91889	ProteinID:EER91889
ProteinID:EER91889.1	GO:GO:0000064	GO:GO:0000066	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810
GO:GO:0006839	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0016020	GO:GO:0016021
GO:GO:1903352	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF640	EnsemblPlantsGene:SORBI_3001G288900	SUPFAM:SSF103506	unigene:Sbi.7682
UniParc:UPI0001A823D7	RefSeq:XP_002464891.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:56549460..56552698

Molecular Weight (calculated)

30280.9 Da

IEP (calculated)

10.058

GRAVY (calculated)

0.209

Length

296 amino acids

Sequence
(BLAST)

001: MGDVARDLTA GTVGGVANLV VGHPFDTIKV KLQSQPTPAP GQLPKYAGAI DAVKQTIAAE GPRGLYKGMG APLATVAAFN ALLFSVRGQM EALLRSEPGV
101: PLTVKQQVVA GAGAGIAVSF LACPTELIKC RLQAQSSLAE AAAASGVALP KGPIDVAKHV VRDAGAKGLF KGLVPTMGRE VPGNAMMFGV YEATKQYLAG
201: GPDTSNLGRG SQILAGGLAG AAFWLSVYPT DVVKSVIQVD DYKKPRYSGS LDALRKIVAA DGVKGLYKGF GPAMARSVPA NAATFVAYEI TRSALG

Best Arabidopsis Sequence Match ( AT5G46800.1 )
(BLAST)

001: MADAWKDLAS GTVGGAAQLV VGHPFDTIKV KLQSQPTPAP GQLPRYTGAI DAVKQTVASE GTKGLYKGMG APLATVAAFN AVLFTVRGQM EGLLRSEAGV
101: PLTISQQFVA GAGAGFAVSF LACPTELIKC RLQAQGALAG ASTTSSVVAA VKYGGPMDVA RHVLRSEGGA RGLFKGLFPT FAREVPGNAT MFAAYEAFKR
201: FLAGGSDTSS LGQGSLIMAG GVAGASFWGI VYPTDVVKSV LQVDDYKNPR YTGSMDAFRK ILKSEGVKGL YKGFGPAMAR SVPANAACFL AYEMTRSSLG

Arabidopsis Description

BOUMitochondrial carnitine/acylcarnitine carrier-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q93XM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.