Factsheet for PGSC0003DMT400005377

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g061170.2.1	Tomato	plastid	77.13	98.69
PGSC0003DMT400021041	Potato	cytosol, mitochondrion, plastid	83.96	82.83
KRH45454	Soybean	cytosol, mitochondrion, vacuole	80.55	79.46
KRH74426	Soybean	cytosol, mitochondrion, vacuole	80.55	79.46
KRH75622	Soybean	cytosol, mitochondrion, vacuole	80.55	79.46
KRH39532	Soybean	cytosol, mitochondrion, plastid	80.2	79.12
GSMUA_Achr5P03430_001	Banana	cytosol, mitochondrion, plastid	79.52	78.72
GSMUA_Achr5P13930_001	Banana	cytosol	78.16	77.36
TraesCS1A01G191900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	77.82	77.03
TraesCS1B01G206900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	77.82	77.03
Os10t0573800-01	Rice	cytosol	77.47	76.69
TraesCS1D01G195500.1	Wheat	golgi	77.13	76.35
GSMUA_Achr4P16910_001	Banana	cytosol, mitochondrion, plastid	77.47	75.42
EER91889	Sorghum	cytosol	76.11	75.34
Os10t0573700-01	Rice	mitochondrion	81.23	75.32
PGSC0003DMT400019719	Potato	cytosol	21.5	73.26
TraesCS1B01G206800.1	Wheat	cytosol, mitochondrion, plastid	76.79	71.89
VIT_02s0012g01250.t01	Wine grape	mitochondrion, plastid	83.28	71.34
TraesCS1D01G195400.1	Wheat	golgi	76.79	63.92
TraesCS1A01G191800.1	Wheat	endoplasmic reticulum, mitochondrion	76.79	58.14
HORVU1Hr1G050130.3	Barley	vacuole	47.44	43.03
PGSC0003DMT400014293	Potato	cytosol, mitochondrion, plastid	34.13	33.78
PGSC0003DMT400058719	Potato	cytosol, mitochondrion, nucleus	35.15	33.77
PGSC0003DMT400042642	Potato	cytosol	33.45	31.11
PGSC0003DMT400076450	Potato	cytosol, endoplasmic reticulum, mitochondrion	34.13	30.58
PGSC0003DMT400047378	Potato	cytosol	23.55	23.88
PGSC0003DMT400081953	Potato	cytosol, peroxisome, plastid	23.55	23.23
PGSC0003DMT400028643	Potato	cytosol, mitochondrion, nucleus	25.94	21.97
PGSC0003DMT400052443	Potato	vacuole	24.23	21.71
PGSC0003DMT400037834	Potato	cytosol	23.21	21.45
PGSC0003DMT400041633	Potato	cytosol	22.87	20.68
PGSC0003DMT400043390	Potato	cytosol, plastid	25.26	17.75

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	UniProt:M0ZPS9	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	EnsemblPlantsGene:PGSC0003DMG400002099	PGSC:PGSC0003DMG400002099	EnsemblPlants:PGSC0003DMT400005377
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF640	SUPFAM:SSF103506	UniParc:UPI00029573A1
SEG:seg	:	:	:	:	:

Description

Mitochondrial carrier protein [Source:PGSC_GENE;Acc:PGSC0003DMG400002099]

Coordinates

chr6:+:44729775..44734039

Molecular Weight (calculated)

30330.0 Da

IEP (calculated)

9.943

GRAVY (calculated)

0.204

Length

293 amino acids

Sequence
(BLAST)

001: MKDLTAGTVG GAAQLIVGHP FDTIKVKLQS QPTPLPGQPP KYAGAIDAVR KTVASEGPRG LYKGMGAPLA TVAAFNALLF TVRGQTEALL RSEPGAPLTV
101: KQQILCGAVA GTAASFLACP TELIKCRLQA HSALASVGSA SVAIKYTGPM DVARHVLRSE GGVRGLFKGM CPTLAREVPG NAVMFGVYEA LKQYFAGGMD
201: TSGLGRGSLI VAGGLAGGSV WFAVYPTDVI KSVIQVDDYR SPKYSGSFDA LKKILASEGV KGLYKGFGPA ITRSIPANAA CFLAYEMTRS SLG

Best Arabidopsis Sequence Match ( AT2G33820.1 )
(BLAST)

001: MGESKTTTGE GFGFYKEYVA GMMAGLATVA VGHPFDTVKV KLQKHNTDVQ GLRYKNGLHC ASRILQTEGV KGLYRGATSS FMGMAFESSL MFGIYSQAKL
101: FLRGTLPDDG PRPEIIVPSA MFGGAIISFV LCPTELVKCR MQIQGTDSLV PNFRRYNSPL DCAVQTVKND GVTGIFRGGS ATLLRECTGN AVFFTVYEYL
201: RYHIHSRLED SKLKDGYLVD MGIGVLTGGL GGIACWSAVL PFDVAKTIIQ TSSEKATERN PFKVLSSIHK RAGLKGCYAG LGPTIVRAFP ANAAAIVAWE
301: FSMKMLGIKR D

Arabidopsis Description

ATMBAC1Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT2G33820]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.