CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, vacuole, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39532	Soybean	cytosol, mitochondrion, plastid	97.64	97.64
KRH75622	Soybean	cytosol, mitochondrion, vacuole	86.2	86.2
KRH45454	Soybean	cytosol, mitochondrion, vacuole	85.86	85.86
PGSC0003DMT400021041	Potato	cytosol, mitochondrion, plastid	82.83	82.83
Solyc10g079200.1.1	Tomato	plastid	82.49	82.49
GSMUA_Achr5P03430_001	Banana	cytosol, mitochondrion, plastid	82.15	82.43
GSMUA_Achr5P13930_001	Banana	cytosol	81.82	82.09
Bra022065.1-P	Field mustard	cytosol, mitochondrion, plastid	81.48	81.21
CDX87675	Canola	cytosol, mitochondrion, plastid	81.48	81.21
Os10t0573800-01	Rice	cytosol	80.47	80.74
EER91889	Sorghum	cytosol	80.47	80.74
CDY37150	Canola	cytosol, mitochondrion, plastid	81.48	80.67
PGSC0003DMT400005377	Potato	cytosol	79.46	80.55
AT5G46800.2	Thale cress	cytosol	81.14	80.33
TraesCS1D01G195500.1	Wheat	golgi	79.8	80.07
TraesCS1B01G206900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	79.8	80.07
TraesCS1A01G191900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	79.8	80.07
CDY35182	Canola	cytosol, mitochondrion, plastid	80.81	80.0
Bra017524.1-P	Field mustard	cytosol, mitochondrion, plastid	80.81	80.0
Os10t0573700-01	Rice	mitochondrion	84.85	79.75
CDY03190	Canola	cytosol, mitochondrion, plastid	80.47	79.67
GSMUA_Achr4P16910_001	Banana	cytosol, mitochondrion, plastid	80.47	79.4
TraesCS1B01G206800.1	Wheat	cytosol, mitochondrion, plastid	82.49	78.27
CDY58507	Canola	cytosol, mitochondrion, plastid	78.11	77.33
Solyc06g061170.2.1	Tomato	plastid	59.6	77.29
Bra024994.1-P	Field mustard	cytosol, mitochondrion, plastid	77.78	77.0
CDX77693	Canola	cytosol, mitochondrion, plastid	77.44	76.67
VIT_02s0012g01250.t01	Wine grape	mitochondrion, plastid	87.54	76.02
TraesCS1D01G195400.1	Wheat	golgi	82.49	69.6
TraesCS1A01G191800.1	Wheat	endoplasmic reticulum, mitochondrion	82.83	63.57
HORVU1Hr1G050130.3	Barley	vacuole	49.16	45.2
KRH65469	Soybean	extracellular	14.48	34.13
KRH20413	Soybean	cytosol, endoplasmic reticulum, peroxisome	30.98	33.45
KRH44361	Soybean	cytosol, mitochondrion, plastid	34.01	33.33
KRH23460	Soybean	cytosol, mitochondrion, plastid	33.0	33.22
KRH50090	Soybean	cytosol	33.67	32.79
KRH47042	Soybean	cytosol, mitochondrion, plastid	33.33	32.67
KRH09864	Soybean	cytosol, mitochondrion, plastid	32.32	32.65
KRH62946	Soybean	extracellular	11.78	32.41
KRH16814	Soybean	cytosol	27.27	25.63
KRH52898	Soybean	cytosol	11.45	25.0
KRH70113	Soybean	mitochondrion	11.45	24.82
KRG98352	Soybean	plasma membrane, vacuole	24.24	24.24
KRH72424	Soybean	cytosol	27.61	23.98
KRH75799	Soybean	plastid	23.57	22.95
KRH66001	Soybean	mitochondrion	23.57	22.95
KRH58947	Soybean	cytosol	16.16	22.75
KRH62186	Soybean	cytosol	22.9	22.67
KRH49267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	23.23	22.62
KRH42853	Soybean	endoplasmic reticulum, mitochondrion, nucleus	22.9	22.59
KRH46454	Soybean	endoplasmic reticulum, plasma membrane, vacuole	20.2	22.39
KRH34619	Soybean	cytosol	22.56	21.97
KRG92168	Soybean	cytosol, endoplasmic reticulum, mitochondrion	22.56	21.97
KRH71523	Soybean	plastid	23.23	21.77
KRH00136	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	23.57	21.15
KRH74503	Soybean	cytosol	22.22	20.82
KRH69658	Soybean	cytosol	22.22	20.82
KRH45564	Soybean	cytosol	21.89	20.7

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EMBL:ACUP02000025	EnsemblPlantsGene:GLYMA_01G019000	GO:GO:0000064	GO:GO:0000066
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:1903352	UniProt:I1J4W1	InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KRH74426
ProteinID:KRH74426	ProteinID:KRH74426.1	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF640	SUPFAM:SSF103506	UniParc:UPI00023379F2	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:1818232..1821908

Molecular Weight (calculated)

30481.4 Da

IEP (calculated)

10.041

GRAVY (calculated)

0.267

Length

297 amino acids

Sequence
(BLAST)

001: MGDVAKDLTA GTVGGAAQLI VGHPFDTIKV KLQSQPTPLP GQLPKYSGAI DAVKQTVAAE GPRGLYKGMG APLATVAAFN AVLFTVRGQM EALLRSHPGA
101: TLTINQQVVC GAGAGVAVSF LACPTELIKC RLQAQSVLAG TGTAAVAVKY GGPMDVARQV LRSEGGVKGL FKGLVPTMAR EVPGNAAMFG VYEALKRLLA
201: GGTDTSGLGR GSLMLAGGVA GAAFWLMVYP TDVVKSVIQV DDYKNPKFSG SIDAFRRISA SEGIKGLYKG FGPAMARSVP ANAACFLAYE MTRSALG

Best Arabidopsis Sequence Match ( AT5G46800.1 )
(BLAST)

001: MADAWKDLAS GTVGGAAQLV VGHPFDTIKV KLQSQPTPAP GQLPRYTGAI DAVKQTVASE GTKGLYKGMG APLATVAAFN AVLFTVRGQM EGLLRSEAGV
101: PLTISQQFVA GAGAGFAVSF LACPTELIKC RLQAQGALAG ASTTSSVVAA VKYGGPMDVA RHVLRSEGGA RGLFKGLFPT FAREVPGNAT MFAAYEAFKR
201: FLAGGSDTSS LGQGSLIMAG GVAGASFWGI VYPTDVVKSV LQVDDYKNPR YTGSMDAFRK ILKSEGVKGL YKGFGPAMAR SVPANAACFL AYEMTRSSLG

Arabidopsis Description

BOUMitochondrial carnitine/acylcarnitine carrier-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q93XM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.