CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022065.1-P	Field mustard	cytosol, mitochondrion, plastid	100.0	100.0
CDY37150	Canola	cytosol, mitochondrion, plastid	100.0	99.33
CDY35182	Canola	cytosol, mitochondrion, plastid	97.32	96.67
CDY03190	Canola	cytosol, mitochondrion, plastid	96.98	96.33
AT5G46800.2	Thale cress	cytosol	95.64	95.0
CDY58507	Canola	cytosol, mitochondrion, plastid	93.29	92.67
CDX77693	Canola	cytosol, mitochondrion, plastid	92.28	91.67
KRH74426	Soybean	cytosol, mitochondrion, vacuole	81.21	81.48
KRH39532	Soybean	cytosol, mitochondrion, plastid	80.2	80.47
KRH45454	Soybean	cytosol, mitochondrion, vacuole	79.19	79.46
KRH75622	Soybean	cytosol, mitochondrion, vacuole	78.86	79.12
GSMUA_Achr5P13930_001	Banana	cytosol	77.85	78.38
GSMUA_Achr5P03430_001	Banana	cytosol, mitochondrion, plastid	77.85	78.38
Solyc10g079200.1.1	Tomato	plastid	77.18	77.44
Os10t0573700-01	Rice	mitochondrion	81.54	76.9
TraesCS1B01G206800.1	Wheat	cytosol, mitochondrion, plastid	79.53	75.72
Solyc06g061170.2.1	Tomato	plastid	58.05	75.55
Os10t0573800-01	Rice	cytosol	74.83	75.34
GSMUA_Achr4P16910_001	Banana	cytosol, mitochondrion, plastid	75.5	74.75
EER91889	Sorghum	cytosol	74.16	74.66
TraesCS1D01G195500.1	Wheat	golgi	73.49	73.99
TraesCS1A01G191900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	73.15	73.65
TraesCS1B01G206900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	73.15	73.65
PGSC0003DMT400019719	Potato	cytosol	20.81	72.09
VIT_02s0012g01250.t01	Wine grape	mitochondrion, plastid	80.54	70.18
TraesCS1D01G195400.1	Wheat	golgi	79.53	67.33
TraesCS1A01G191800.1	Wheat	endoplasmic reticulum, mitochondrion	79.53	61.24
HORVU1Hr1G050130.3	Barley	vacuole	48.99	45.2
CDX87281	Canola	cytosol, mitochondrion, plastid	33.89	32.37
CDY58780	Canola	cytosol, mitochondrion, plastid	33.89	32.37
CDY37683	Canola	cytosol, peroxisome, plastid	32.89	32.24
CDY57210	Canola	cytosol, peroxisome, plastid	32.55	31.91
CDY51585	Canola	plasma membrane	27.18	26.64
CDX67588	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	27.18	26.64
CDX73508	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	27.18	26.56
CDX78208	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	27.18	26.56
CDY13183	Canola	plasma membrane	24.16	25.62
CDX76170	Canola	cytosol, peroxisome, plastid	25.5	24.92
CDY02849	Canola	plasma membrane	24.5	24.17
CDY32672	Canola	plasma membrane	24.5	24.17
CDY33772	Canola	mitochondrion	24.83	24.03
CDX80317	Canola	endoplasmic reticulum, plasma membrane	24.5	23.93
CDY11206	Canola	cytosol	25.84	22.78
CDY22103	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	23.83	22.61
CDY34292	Canola	cytosol, plasma membrane, plastid	23.83	22.54
CDY03439	Canola	cytosol, plasma membrane, plastid	23.83	22.54
CDY35862	Canola	cytosol	22.48	22.41
CDY42293	Canola	cytosol	22.48	22.41
CDY44940	Canola	cytosol	22.48	22.41
CDX88877	Canola	cytosol	22.48	22.41
CDX92503	Canola	cytosol	22.48	22.41
CDY21942	Canola	plastid	23.15	21.9
CDX91241	Canola	cytosol	21.14	21.72
CDX97299	Canola	extracellular	18.12	21.69
CDY13754	Canola	cytosol	22.82	21.59
CDX89481	Canola	cytosol	22.82	21.45
CDY25603	Canola	cytosol	22.82	21.45
CDX76916	Canola	cytosol	22.48	21.27
CDX91242	Canola	extracellular	1.34	21.05
CDX97871	Canola	cytosol	7.72	20.91
CDX81127	Canola	plasma membrane	22.82	20.3
CDY67400	Canola	plasma membrane	22.82	20.3
CDY55007	Canola	cytosol, peroxisome, plasma membrane	24.83	20.27
CDX70888	Canola	cytosol, extracellular, plastid	16.44	19.22
CDX80777	Canola	cytosol	25.84	18.97
CDY27701	Canola	cytosol	21.14	18.53

Protein Annotations

EnsemblPlants:CDX87675	EnsemblPlantsGene:GSBRNA2T00146686001	Gene3D:1.50.40.10	GO:A0A078DEM2	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF640	PFAM:PF00153	PFscan:PS50920	ProteinID:CDX87675	ProteinID:CDX87675.1	SEG:seg
SUPFAM:SSF103506	UniParc:UPI0001D163B4	MapMan:24.2.13	:	:	:

Description

BnaC02g32740D

Coordinates

chrLK031851:+:75674..77113

Molecular Weight (calculated)

30750.2 Da

IEP (calculated)

9.969

GRAVY (calculated)

0.131

Length

298 amino acids

Sequence
(BLAST)

001: MADAAKDLAS GTVGGAAQLI VGHPFDTIKV KLQSQPAPSP GQPPRYTGAI DAVKQTVASE GPKGLYKGMG APLATVAAFN AVLFTVRGQM EGLLRSEPGV
101: PLTISQQFVC GAGAGFAVSF LACPTELIKC RLQAQGAGAS TTGSVVAAVK YGGPMDVARH VLRSEGGARG LFKGLFPTFA REVPGNATMF AAYEAFKRFL
201: AGGSDTSSLG QGSLIMAGGV AGASFWGFVY PTDVVKSVLQ VDDYKNPKYK GSMDAFRKIL KAEGVKGLYK GFGPAMARSV PANAACFLAY EMTRSSLG

Best Arabidopsis Sequence Match ( AT5G46800.1 )
(BLAST)

001: MADAWKDLAS GTVGGAAQLV VGHPFDTIKV KLQSQPTPAP GQLPRYTGAI DAVKQTVASE GTKGLYKGMG APLATVAAFN AVLFTVRGQM EGLLRSEAGV
101: PLTISQQFVA GAGAGFAVSF LACPTELIKC RLQAQGALAG ASTTSSVVAA VKYGGPMDVA RHVLRSEGGA RGLFKGLFPT FAREVPGNAT MFAAYEAFKR
201: FLAGGSDTSS LGQGSLIMAG GVAGASFWGI VYPTDVVKSV LQVDDYKNPR YTGSMDAFRK ILKSEGVKGL YKGFGPAMAR SVPANAACFL AYEMTRSSLG

Arabidopsis Description

BOUMitochondrial carnitine/acylcarnitine carrier-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q93XM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.