CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, cytosol, peroxisome

Predictor Summary:

cytosol 2
plastid 3
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034186.1-P	Field mustard	plastid	99.04	99.04
CDY21942	Canola	plastid	96.5	96.19
CDX91242	Canola	extracellular	5.73	94.74
CDX91241	Canola	cytosol	76.43	82.76
AT4G03115.3	Thale cress	cytosol	89.17	80.92
CDX97299	Canola	extracellular	60.19	75.9
KRH71523	Soybean	plastid	68.15	67.51
VIT_07s0104g01160.t01	Wine grape	cytosol	66.56	67.2
TraesCS5D01G109300.2	Wheat	plastid	61.15	64.65
Solyc09g074370.2.1	Tomato	cytosol	57.32	63.16
KXG23597	Sorghum	mitochondrion	59.55	62.75
HORVU5Hr1G026160.2	Barley	mitochondrion, plastid	59.55	62.13
Zm00001d023895_P007	Maize	mitochondrion	58.6	61.74
GSMUA_Achr1P14700_001	Banana	cytosol	62.74	56.77
Os12t0533800-01	Rice	endoplasmic reticulum, extracellular	40.45	54.98
PGSC0003DMT400043390	Potato	cytosol, plastid	67.52	50.84
TraesCS5A01G096600.1	Wheat	mitochondrion, plastid	41.4	42.9
TraesCS5B01G102500.1	Wheat	mitochondrion	41.08	42.43
CDX97871	Canola	cytosol	11.78	33.64
CDY13183	Canola	plasma membrane	27.71	30.96
CDY02849	Canola	plasma membrane	29.62	30.79
CDY34292	Canola	cytosol, plasma membrane, plastid	30.57	30.48
CDY32672	Canola	plasma membrane	29.3	30.46
CDX89481	Canola	cytosol	30.57	30.28
CDY51585	Canola	plasma membrane	29.3	30.26
CDX67588	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.3	30.26
CDY03439	Canola	cytosol, plasma membrane, plastid	30.25	30.16
CDY25603	Canola	cytosol	30.25	29.97
CDY13754	Canola	cytosol	29.94	29.84
CDX76916	Canola	cytosol	29.62	29.52
CDX80317	Canola	endoplasmic reticulum, plasma membrane	28.66	29.51
CDX76170	Canola	cytosol, peroxisome, plastid	28.66	29.51
CDX73508	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	28.66	29.51
CDX78208	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	28.66	29.51
CDX81127	Canola	plasma membrane	31.21	29.25
CDY67400	Canola	plasma membrane	31.21	29.25
CDY33772	Canola	mitochondrion	28.34	28.9
CDX88877	Canola	cytosol	25.16	26.42
CDY42293	Canola	cytosol	24.84	26.09
CDY44940	Canola	cytosol	24.84	26.09
CDX92503	Canola	cytosol	24.84	26.09
CDY35862	Canola	cytosol	24.84	26.09
CDY27701	Canola	cytosol	27.07	25.0
CDY55007	Canola	cytosol, peroxisome, plasma membrane	28.98	24.93
CDY58507	Canola	cytosol, mitochondrion, plastid	22.93	24.0
CDY03190	Canola	cytosol, mitochondrion, plastid	22.93	24.0
CDY35182	Canola	cytosol, mitochondrion, plastid	22.93	24.0
CDX87675	Canola	cytosol, mitochondrion, plastid	22.61	23.83
CDX77693	Canola	cytosol, mitochondrion, plastid	22.61	23.67
CDY37150	Canola	cytosol, mitochondrion, plastid	22.61	23.67
CDX70888	Canola	cytosol, extracellular, plastid	18.79	23.14
CDY58780	Canola	cytosol, mitochondrion, plastid	22.93	23.08
CDX87281	Canola	cytosol, mitochondrion, plastid	22.93	23.08
CDY11206	Canola	cytosol	24.52	22.78
CDX80777	Canola	cytosol	24.52	18.97
CDY37683	Canola	cytosol, peroxisome, plastid	16.56	17.11
CDY57210	Canola	cytosol, peroxisome, plastid	15.92	16.45

Protein Annotations

EnsemblPlants:CDY22103	EnsemblPlantsGene:GSBRNA2T00018490001	Gene3D:1.50.40.10	GO:A0A078GBQ9	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF664	PFAM:PF00153	PFscan:PS50920	ProteinID:CDY22103	ProteinID:CDY22103.1	SEG:seg
SUPFAM:SSF103506	UniParc:UPI0004EDDB3D	UniProt:A0A078GBQ9	MapMan:24.2.13	:	:

Description

BnaA09g01320DBnaA09g01320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBQ9]

Coordinates

chrLK032127:-:571087..573183

Molecular Weight (calculated)

33664.9 Da

IEP (calculated)

10.376

GRAVY (calculated)

0.307

Length

314 amino acids

Sequence
(BLAST)

001: MMGDISPPVA SIPVVEGNAQ AMNSKTLLPP LSTVASHFGT SGLSVALATG VTHPLDVLKV RLQMQHVGQR GPLIGMTGIF LQLMKQEGPR SLYLGLTPAL
101: TRSVLYGGLR LGLYEPTKVC FDWAFESTNV LVKIASGAFA GAVATALTNP VEVVKVRLQM NPNAVPIAEV REVVSKEGIG ALWKGVGPAM VRAAALTASQ
201: LATYDETKRI LVKRTSLEEG FHLHLCSSVV AGVVSTLITA PIDMIKTRLM LQQNSGSVRI YRNGFHCGYK VIRKEGPLAL YKGGFAIFAR LGPQTMITFI
301: LCEKLRSLAG LHKM

Best Arabidopsis Sequence Match ( AT4G03115.1 )
(BLAST)

001: MIGDISPPVT SIPVVEGNEE LRKPQNLIPP FSKVVSHFGI SGISVALATG VTHPLDVVKV RLQMQHVGQR GPLIGMTGIF LQLMKNEGRR SLYLGLTPAL
101: TRSVLYGGLR LGLYEPTKVS FDWAFGSTNV LVKIASGAFA GAFSTALTNP VEVVKVRLQM NPNAVPIAEV REIVSKEGIG ALWKGVGPAM VRAAALTASQ
201: LATYDEAKRI LVKRTSLEEG FHLHLCSSVV AGLVSTLITA PMDMIKTRLM LQQGSESTKT YRNGFHCGYK VVRKEGPLAL YKGGFAIFAR LGPQTMITFI
301: LCEKLRSLAG LHTM

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT4G03115]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.