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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, peroxisome, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX91242 Canola extracellular 5.49 100.0
Bra034186.1-P Field mustard plastid 81.5 89.81
CDY22103 Canola cytosol, endoplasmic reticulum, peroxisome, plastid 80.92 89.17
CDY21942 Canola plastid 80.35 88.25
CDX91241 Canola cytosol 68.79 82.07
CDX97299 Canola extracellular 55.2 76.71
Bra018517.1-P Field mustard cytosol 54.34 76.11
VIT_07s0104g01160.t01 Wine grape cytosol 60.4 67.2
KRH71523 Soybean plastid 60.12 65.62
TraesCS5D01G109300.2 Wheat plastid 54.91 63.97
Solyc09g074370.2.1 Tomato cytosol 52.31 63.51
KXG23597 Sorghum mitochondrion 53.76 62.42
HORVU5Hr1G026160.2 Barley mitochondrion, plastid 53.47 61.46
Zm00001d023895_P007 Maize mitochondrion 52.6 61.07
GSMUA_Achr1P14700_001 Banana cytosol 56.94 56.77
Os12t0533800-01 Rice endoplasmic reticulum, extracellular 36.71 54.98
PGSC0003DMT400043390 Potato cytosol, plastid 61.27 50.84
TraesCS5A01G096600.1 Wheat mitochondrion, plastid 38.15 43.56
TraesCS5B01G102500.1 Wheat mitochondrion 37.86 43.09
AT1G14140.1 Thale cress mitochondrion 27.46 31.15
AT4G24570.1 Thale cress cytosol 27.46 30.35
AT5G58970.1 Thale cress endoplasmic reticulum, vacuole 26.59 30.16
AT3G54110.1 Thale cress cytosol, plasma membrane 26.59 30.07
AT2G22500.1 Thale cress cytosol 27.17 30.03
AT5G09470.1 Thale cress extracellular, plasma membrane 28.32 29.08
AT5G19760.1 Thale cress cytosol 23.41 27.18
AT5G01340.1 Thale cress cytosol, mitochondrion, plastid 21.68 24.27
AT5G46800.2 Thale cress cytosol 19.94 23.0
AT1G79900.1 Thale cress cytosol 19.65 22.97
AT2G33820.3 Thale cress cytosol, mitochondrion, plastid 14.45 15.67
Protein Annotations
Gene3D:1.50.40.10MapMan:24.2.13EntrezGene:828074UniProt:A0A1P8B7A0ProteinID:ANM67469.1ArrayExpress:AT4G03115
EnsemblPlantsGene:AT4G03115RefSeq:AT4G03115TAIR:AT4G03115RefSeq:AT4G03115-TAIR-GEnsemblPlants:AT4G03115.3Unigene:At.45460
GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:IPR018108InterPro:IPR023395InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sfRefSeq:NP_001329297.1PFAM:PF00153PFscan:PS50920PANTHER:PTHR24089PANTHER:PTHR24089:SF664
SUPFAM:SSF103506UniParc:UPI0008494878SEG:seg:::
Description
Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT4G03115]
Coordinates
chr4:-:1382438..1385497
Molecular Weight (calculated)
37515.5 Da
IEP (calculated)
10.124
GRAVY (calculated)
0.236
Length
346 amino acids
Sequence
(BLAST)
001: MIGDISPPVT SIPGSSDLFA LCICLNFNPK IIESFDLLSH KLKHEVVEGN EELRKPQNLI PPFSKVVSHF GISGISVALA TGVTHPLDVV KVRLQMQHVG
101: QRGPLIGMTG IFLQLMKNEG RRSLYLGLTP ALTRSVLYGG LRLGLYEPTK VSFDWAFGST NVLVKIASGA FAGAFSTALT NPVEVVKVRL QMNPNAVPIA
201: EVREIVSKEG IGALWKGVGP AMVRAAALTA SQLATYDEAK RILVKRTSLE EGFHLHLCSS VVAGLVSTLI TAPMDMIKTR LMLQQGSEST KTYRNGFHCG
301: YKVVRKEGPL ALYKGGFAIF ARLGPQTMIT FILCEKLRSL AGLHTM
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.