Factsheet for AT5G19760.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44940	Canola	cytosol	94.63	94.31
CDY42293	Canola	cytosol	94.3	93.98
CDY35862	Canola	cytosol	94.3	93.98
Bra020060.1-P	Field mustard	cytosol	94.3	93.98
Bra002259.1-P	Field mustard	cytosol	81.21	93.44
CDX92503	Canola	cytosol	93.62	93.31
Solyc01g005620.2.1	Tomato	plastid	85.57	85.86
PGSC0003DMT400081953	Potato	cytosol, peroxisome, plastid	84.56	84.85
KRH42853	Soybean	endoplasmic reticulum, mitochondrion, nucleus	84.56	83.72
GSMUA_Achr9P28780_001	Banana	cytosol, peroxisome, plastid	83.89	83.61
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	82.89	82.61
GSMUA_Achr6P14540_001	Banana	cytosol, mitochondrion, plastid	82.55	82.27
TraesCS1A01G124600.1	Wheat	golgi, unclear	82.89	81.79
TraesCS1B01G142400.1	Wheat	cytosol, extracellular, peroxisome	82.89	81.79
TraesCS1D01G129200.2	Wheat	cytosol, extracellular, peroxisome	82.89	81.79
Os05t0208000-01	Rice	cytosol, extracellular, peroxisome	83.89	81.7
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	82.21	81.67
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	81.54	81.27
HORVU1Hr1G028720.1	Barley	cytosol, extracellular, peroxisome	82.21	81.13
EES17872	Sorghum	cytosol, extracellular, peroxisome, plastid	83.22	80.52
Zm00001d037725_P001	Maize	plastid	83.22	80.52
Zm00001d037727_P001	Maize	plastid	83.22	79.74
Os11t0432400-01	Rice	cytosol	81.88	78.96
HORVU3Hr1G025820.1	Barley	plasma membrane	80.87	78.76
TraesCS3B01G153900.1	Wheat	golgi	80.87	78.76
TraesCS3D01G136800.1	Wheat	golgi	80.87	78.5
TraesCS3A01G135800.1	Wheat	cytosol	80.2	78.1
VIT_06s0004g00470.t01	Wine grape	cytosol	81.88	70.72
AT4G24570.1	Thale cress	cytosol	38.93	37.06
AT2G22500.1	Thale cress	cytosol	36.58	34.82
AT5G09470.1	Thale cress	extracellular, plasma membrane	36.24	32.05
AT1G14140.1	Thale cress	mitochondrion	31.88	31.15
AT5G58970.1	Thale cress	endoplasmic reticulum, vacuole	30.2	29.51
AT3G54110.1	Thale cress	cytosol, plasma membrane	29.87	29.09
AT4G03115.3	Thale cress	cytosol	27.18	23.41
AT5G46800.2	Thale cress	cytosol	22.82	22.67
AT5G01340.1	Thale cress	cytosol, mitochondrion, plastid	23.49	22.65
AT1G79900.1	Thale cress	cytosol	19.46	19.59
AT2G33820.3	Thale cress	cytosol, mitochondrion, plastid	17.45	16.3

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	MapMan:5.1.1.1	EntrezGene:832096	UniProt:A0A178UIU8	ProteinID:AED92746.1
EMBL:AF296838	EMBL:AF360153	EMBL:AJ311780	EMBL:AK226470	ArrayExpress:AT5G19760	EnsemblPlantsGene:AT5G19760
RefSeq:AT5G19760	TAIR:AT5G19760	RefSeq:AT5G19760-TAIR-G	EnsemblPlants:AT5G19760.1	TAIR:AT5G19760.1	EMBL:AY056307
EMBL:AY085901	Unigene:At.24857	GO:GO:0003674	GO:GO:0005215	GO:GO:0005310	GO:GO:0005575
GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0005773	GO:GO:0005774	GO:GO:0006810	GO:GO:0006835	GO:GO:0006839	GO:GO:0008150
GO:GO:0009506	GO:GO:0009507	GO:GO:0009536	GO:GO:0009941	GO:GO:0015142	GO:GO:0015367
GO:GO:0015742	GO:GO:0016020	GO:GO:0016021	GO:GO:0030312	GO:GO:0035674	GO:GO:0055085
InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	RefSeq:NP_197477.1
ProteinID:OAO93639.1	PFAM:PF00153	PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084
PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0005052	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007131	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089
PANTHER:PTHR24089:SF427	UniProt:Q9C5M0	SUPFAM:SSF103506	UniParc:UPI000008C18D	:	:

Description

DTCMitochondrial dicarboxylate/tricarboxylate transporter DTC [Source:UniProtKB/Swiss-Prot;Acc:Q9C5M0]

Coordinates

chr5:-:6679306..6682054

Molecular Weight (calculated)

31914.2 Da

IEP (calculated)

9.610

GRAVY (calculated)

0.129

Length

298 amino acids

Sequence
(BLAST)

001: MAEEKKAPIS VWTTVKPFVN GGASGMLATC VIQPIDMIKV RIQLGQGSAA SITTNMLKNE GVGAFYKGLS AGLLRQATYT TARLGSFKLL TAKAIESNDG
101: KPLPLYQKAL CGLTAGAIGA CVGSPADLAL IRMQADNTLP LAQRRNYTNA FHALTRISAD EGVLALWKGC GPTVVRAMAL NMGMLASYDQ SAEYMRDNLG
201: FGEMSTVVGA SAVSGFCAAA CSLPFDFVKT QIQKMQPDAQ GKYPYTGSLD CAMKTLKEGG PLKFYSGFPV YCVRIAPHVM MTWIFLNQIT KFQKKIGM

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.