Factsheet for GSMUA_Achr10P14230_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	94.33	94.65
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	94.33	94.65
GSMUA_Achr6P14540_001	Banana	cytosol, mitochondrion, plastid	94.0	94.31
GSMUA_Achr9P28780_001	Banana	cytosol, peroxisome, plastid	93.33	93.65
Os05t0208000-01	Rice	cytosol, extracellular, peroxisome	88.0	86.27
TraesCS3B01G153900.1	Wheat	golgi	87.67	85.95
TraesCS3D01G136800.1	Wheat	golgi	87.67	85.67
HORVU3Hr1G025820.1	Barley	plasma membrane	87.33	85.62
TraesCS3A01G135800.1	Wheat	cytosol	87.0	85.29
TraesCS1B01G142400.1	Wheat	cytosol, extracellular, peroxisome	85.67	85.1
TraesCS1A01G124600.1	Wheat	golgi, unclear	85.67	85.1
TraesCS1D01G129200.2	Wheat	cytosol, extracellular, peroxisome	85.67	85.1
EES17872	Sorghum	cytosol, extracellular, peroxisome, plastid	87.0	84.74
Bra002259.1-P	Field mustard	cytosol	73.0	84.56
HORVU1Hr1G028720.1	Barley	cytosol, extracellular, peroxisome	85.0	84.44
KRH42853	Soybean	endoplasmic reticulum, mitochondrion, nucleus	84.67	84.39
Zm00001d037725_P001	Maize	plastid	86.33	84.09
CDX92503	Canola	cytosol	83.67	83.95
CDY35862	Canola	cytosol	83.33	83.61
PGSC0003DMT400081953	Potato	cytosol, peroxisome, plastid	82.67	83.5
CDY42293	Canola	cytosol	83.0	83.28
Zm00001d037727_P001	Maize	plastid	86.0	82.96
CDY44940	Canola	cytosol	82.67	82.94
Bra020060.1-P	Field mustard	cytosol	82.33	82.61
Bra006516.1-P	Field mustard	cytosol	82.0	82.27
CDX88877	Canola	cytosol	82.0	82.27
AT5G19760.1	Thale cress	cytosol	81.67	82.21
CDX70888	Canola	cytosol, extracellular, plastid	65.0	76.47
Solyc01g021740.1.1	Tomato	cytosol, peroxisome, plastid	29.33	75.21
VIT_06s0004g00470.t01	Wine grape	cytosol	82.0	71.3
GSMUA_Achr3P06760_001	Banana	cytosol	35.0	38.75
GSMUA_Achr5P17950_001	Banana	cytosol	34.0	36.96
GSMUA_Achr10P...	Banana	mitochondrion	17.33	35.37
GSMUA_Achr9P03550_001	Banana	cytosol	29.67	29.37
GSMUA_Achr6P30530_001	Banana	cytosol	16.33	29.34
GSMUA_Achr6P33850_001	Banana	cytosol	29.0	28.71
GSMUA_Achr6P15000_001	Banana	plasma membrane	28.67	28.29
GSMUA_Achr7P10030_001	Banana	cytosol, extracellular, golgi, mitochondrion	3.0	25.71
GSMUA_Achr1P14700_001	Banana	cytosol	27.0	23.34
GSMUA_Achr5P13930_001	Banana	cytosol	22.0	22.3
GSMUA_Achr4P16910_001	Banana	cytosol, mitochondrion, plastid	22.33	22.26
GSMUA_Achr7P15600_001	Banana	mitochondrion	14.0	22.11
GSMUA_Achr10P...	Banana	cytosol	16.33	21.88
GSMUA_Achr5P03430_001	Banana	cytosol, mitochondrion, plastid	20.67	20.95
GSMUA_Achr4P33320_001	Banana	cytosol, mitochondrion, nucleus	19.67	19.28
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	19.33	18.71
GSMUA_Achr6P14120_001	Banana	cytosol, endoplasmic reticulum, mitochondrion	18.33	17.03

Protein Annotations

EnsemblPlants:GSMUA_Achr10P14230_001	EnsemblPlants:GSMUA_Achr10T14230_001	EnsemblPlantsGene:GSMUA_Achr10G14230_001	Gene3D:1.50.40.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF427	PFAM:PF00153	PFscan:PS50920	SEG:seg	SUPFAM:SSF103506	UniParc:UPI00029649E5
UniProt:M0RI49	MapMan:5.1.1.1	MapMan:24.2.13	:	:	:

Description

Putative mitochondrial 2-oxoglutarate/malate carrier protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G14230_001]

Coordinates

chr10:+:22573721..22577330

Molecular Weight (calculated)

32042.2 Da

IEP (calculated)

10.189

GRAVY (calculated)

0.133

Length

300 amino acids

Sequence
(BLAST)

001: MTEGKPKSRQ SGVWSTIKPF VNGGASGMLA TCVIQPIDMV KVRIQLGQGS AVQVTKNMLA NEGFGSFYKG LSAGLLRQAT YTTARLGSFR VLTNKAVEAN
101: DGKPLPLLQK AAIGLTAGAI GASVGSPADL ALIRMQADAT LPAAQRRNYK NAFHALYRII ADEGVLALWK GAGPTVVRAM SLNMGMLASY DQSIELFRDS
201: LGFGEVSTVI GASAVSGFFA SACSLPFDYV KTQIQKMQPD ATGKYPYTGS LDCVMKTLKS GGPFKFYTGF PVYCVRIAPH VMMTWIFLNQ IQKAQQAVGL

Best Arabidopsis Sequence Match ( AT5G19760.1 )
(BLAST)

001: MAEEKKAPIS VWTTVKPFVN GGASGMLATC VIQPIDMIKV RIQLGQGSAA SITTNMLKNE GVGAFYKGLS AGLLRQATYT TARLGSFKLL TAKAIESNDG
101: KPLPLYQKAL CGLTAGAIGA CVGSPADLAL IRMQADNTLP LAQRRNYTNA FHALTRISAD EGVLALWKGC GPTVVRAMAL NMGMLASYDQ SAEYMRDNLG
201: FGEMSTVVGA SAVSGFCAAA CSLPFDFVKT QIQKMQPDAQ GKYPYTGSLD CAMKTLKEGG PLKFYSGFPV YCVRIAPHVM MTWIFLNQIT KFQKKIGM

Arabidopsis Description

DTCMitochondrial dicarboxylate/tricarboxylate transporter DTC [Source:UniProtKB/Swiss-Prot;Acc:Q9C5M0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.