Factsheet for GSMUA_Achr9P28780_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	94.98	94.98
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	93.65	93.33
GSMUA_Achr6P14540_001	Banana	cytosol, mitochondrion, plastid	92.98	92.98
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	92.64	92.64
Os05t0208000-01	Rice	cytosol, extracellular, peroxisome	88.63	86.6
TraesCS3B01G153900.1	Wheat	golgi	87.63	85.62
TraesCS3D01G136800.1	Wheat	golgi	87.63	85.34
Bra002259.1-P	Field mustard	cytosol	73.91	85.33
HORVU3Hr1G025820.1	Barley	plasma membrane	87.29	85.29
EES17872	Sorghum	cytosol, extracellular, peroxisome, plastid	87.63	85.06
TraesCS3A01G135800.1	Wheat	cytosol	86.96	84.97
TraesCS1D01G129200.2	Wheat	cytosol, extracellular, peroxisome	85.62	84.77
TraesCS1B01G142400.1	Wheat	cytosol, extracellular, peroxisome	85.62	84.77
TraesCS1A01G124600.1	Wheat	golgi, unclear	85.62	84.77
CDX92503	Canola	cytosol	84.62	84.62
Zm00001d037725_P001	Maize	plastid	86.96	84.42
CDY35862	Canola	cytosol	84.28	84.28
HORVU1Hr1G028720.1	Barley	cytosol, extracellular, peroxisome	84.95	84.11
CDY42293	Canola	cytosol	83.95	83.95
Zm00001d037727_P001	Maize	plastid	87.29	83.92
AT5G19760.1	Thale cress	cytosol	83.61	83.89
PGSC0003DMT400081953	Potato	cytosol, peroxisome, plastid	83.28	83.84
CDY44940	Canola	cytosol	83.61	83.61
KRH42853	Soybean	endoplasmic reticulum, mitochondrion, nucleus	83.95	83.39
Bra020060.1-P	Field mustard	cytosol	83.28	83.28
CDX88877	Canola	cytosol	82.94	82.94
Bra006516.1-P	Field mustard	cytosol	82.94	82.94
CDX70888	Canola	cytosol, extracellular, plastid	65.89	77.25
Solyc01g021740.1.1	Tomato	cytosol, peroxisome, plastid	29.1	74.36
VIT_06s0004g00470.t01	Wine grape	cytosol	81.27	70.43
GSMUA_Achr3P06760_001	Banana	cytosol	35.12	38.75
GSMUA_Achr5P17950_001	Banana	cytosol	34.11	36.96
GSMUA_Achr10P...	Banana	mitochondrion	18.06	36.73
GSMUA_Achr6P30530_001	Banana	cytosol	17.06	30.54
GSMUA_Achr9P03550_001	Banana	cytosol	30.1	29.7
GSMUA_Achr6P33850_001	Banana	cytosol	29.43	29.04
GSMUA_Achr7P10030_001	Banana	cytosol, extracellular, golgi, mitochondrion	3.34	28.57
GSMUA_Achr6P15000_001	Banana	plasma membrane	28.09	27.63
GSMUA_Achr1P14700_001	Banana	cytosol	28.43	24.5
GSMUA_Achr5P13930_001	Banana	cytosol	22.41	22.64
GSMUA_Achr7P15600_001	Banana	mitochondrion	14.38	22.63
GSMUA_Achr4P16910_001	Banana	cytosol, mitochondrion, plastid	22.07	21.93
GSMUA_Achr10P...	Banana	cytosol	16.39	21.88
GSMUA_Achr5P03430_001	Banana	cytosol, mitochondrion, plastid	21.07	21.28
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	19.73	19.03
GSMUA_Achr4P33320_001	Banana	cytosol, mitochondrion, nucleus	19.06	18.63
GSMUA_Achr6P14120_001	Banana	cytosol, endoplasmic reticulum, mitochondrion	19.4	17.96

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	MapMan:5.1.1.1	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr9G28780_001	EnsemblPlants:GSMUA_Achr9P28780_001	EnsemblPlants:GSMUA_Achr9T28780_001
InterPro:IPR018108	InterPro:IPR023395	UniProt:M0U4D5	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF427	SUPFAM:SSF103506
UniParc:UPI000294D66E	SEG:seg	:	:	:	:

Description

Putative mitochondrial 2-oxoglutarate/malate carrier protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G28780_001]

Coordinates

chr9:-:32658864..32664966

Molecular Weight (calculated)

31818.1 Da

IEP (calculated)

10.014

GRAVY (calculated)

0.151

Length

299 amino acids

Sequence
(BLAST)

001: MAEGKPKGQS GVWGTVKPFV NGGASGMLAT CVIQPIDMVK VRIQLGQGSA VQITKNMLAN EGFGSFYKGL SAGLLRQATY TTARLGSFRV LTNKAVEAND
101: GKPLPLLQKA AIGLTAGAIG ACVGSPADLA LIRMQADATL PVAQRRNYKN AFHALYRIVA DEGVLALWKG AGPTVVRAMS LNMGMLASYD QSVELFRDSL
201: GFGEVSTVLG ASAVSGLCAS ACSLPFDYVK TQIQKMQPDA NGKYPYTGSL DCAMKTLKNG GPFKFYTGFP IYCVRIAPHV MMTWIFLNQI QKIQKSVGL

Best Arabidopsis Sequence Match ( AT5G19760.1 )
(BLAST)

001: MAEEKKAPIS VWTTVKPFVN GGASGMLATC VIQPIDMIKV RIQLGQGSAA SITTNMLKNE GVGAFYKGLS AGLLRQATYT TARLGSFKLL TAKAIESNDG
101: KPLPLYQKAL CGLTAGAIGA CVGSPADLAL IRMQADNTLP LAQRRNYTNA FHALTRISAD EGVLALWKGC GPTVVRAMAL NMGMLASYDQ SAEYMRDNLG
201: FGEMSTVVGA SAVSGFCAAA CSLPFDFVKT QIQKMQPDAQ GKYPYTGSLD CAMKTLKEGG PLKFYSGFPV YCVRIAPHVM MTWIFLNQIT KFQKKIGM

Arabidopsis Description

DTCMitochondrial dicarboxylate/tricarboxylate transporter DTC [Source:UniProtKB/Swiss-Prot;Acc:Q9C5M0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.