Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g005620.2.1 | Tomato | plastid | 87.18 | 34.34 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plastid | 78.63 | 30.77 |
| GSMUA_Achr6P14540_001 | Banana | cytosol, mitochondrion, plastid | 76.92 | 30.1 |
| GSMUA_Achr10P... | Banana | cytosol, peroxisome, plastid | 76.07 | 29.77 |
| Os05t0208000-01 | Rice | cytosol, extracellular, peroxisome | 76.92 | 29.41 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 75.21 | 29.33 |
| TraesCS1D01G129200.2 | Wheat | cytosol, extracellular, peroxisome | 75.21 | 29.14 |
| TraesCS1B01G142400.1 | Wheat | cytosol, extracellular, peroxisome | 75.21 | 29.14 |
| TraesCS1A01G124600.1 | Wheat | golgi, unclear | 75.21 | 29.14 |
| GSMUA_Achr9P28780_001 | Banana | cytosol, peroxisome, plastid | 74.36 | 29.1 |
| HORVU3Hr1G025820.1 | Barley | plasma membrane | 76.07 | 29.09 |
| EES17872 | Sorghum | cytosol, extracellular, peroxisome, plastid | 76.07 | 28.9 |
| HORVU1Hr1G028720.1 | Barley | cytosol, extracellular, peroxisome | 74.36 | 28.81 |
| TraesCS3B01G153900.1 | Wheat | golgi | 75.21 | 28.76 |
| TraesCS3A01G135800.1 | Wheat | cytosol | 75.21 | 28.76 |
| TraesCS3D01G136800.1 | Wheat | golgi | 75.21 | 28.66 |
| Zm00001d037725_P001 | Maize | plastid | 75.21 | 28.57 |
| Zm00001d037727_P001 | Maize | plastid | 75.21 | 28.3 |
| Solyc05g051400.2.1 | Tomato | plastid | 28.21 | 10.96 |
| Solyc11g010500.1.1 | Tomato | cytosol | 28.21 | 10.19 |
| Solyc09g031680.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 24.79 | 9.83 |
| Solyc09g011920.2.1 | Tomato | plastid | 25.64 | 9.8 |
| Solyc06g061170.2.1 | Tomato | plastid | 18.8 | 9.61 |
| Solyc09g074370.2.1 | Tomato | cytosol | 21.37 | 8.77 |
| Solyc05g007730.2.1 | Tomato | cytosol | 22.22 | 8.12 |
| Solyc10g079200.1.1 | Tomato | plastid | 16.24 | 6.4 |
| Solyc06g066680.2.1 | Tomato | cytosol | 15.38 | 5.71 |
| Solyc10g009090.2.1 | Tomato | extracellular | 14.53 | 5.57 |
| Solyc03g120100.2.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion | 13.68 | 5.33 |
| Solyc02g077910.2.1 | Tomato | cytosol, endoplasmic reticulum, plastid | 11.97 | 4.67 |
Protein Annotations
| EnsemblPlants:Solyc01g021740.1.1 | EnsemblPlantsGene:Solyc01g021740.1 | Gene3D:1.50.40.10 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF427 |
| PFAM:PF00153 | PFscan:PS50920 | SUPFAM:SSF103506 | TMHMM:TMhelix | UniParc:UPI0002762F49 | UniProt:K4AV55 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:32800823..32801176
Molecular Weight (calculated)
13269.3 Da
IEP (calculated)
9.485
GRAVY (calculated)
0.160
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLFASYDQS VEFFRDNLGM GEVATVIGAS SVSGFFVAAC NLPFDYVKTQ IQKLQLDAEG KLSYTSSFDC AMKTLKAGRP FKFYARFPVY CVRIAPHVMM
101: TWIFLNQIQK VEKKIRL
101: TWIFLNQIQK VEKKIRL
001: MAEEKKAPIS VWTTVKPFVN GGASGMLATC VIQPIDMIKV RIQLGQGSAA SITTNMLKNE GVGAFYKGLS AGLLRQATYT TARLGSFKLL TAKAIESNDG
101: KPLPLYQKAL CGLTAGAIGA CVGSPADLAL IRMQADNTLP LAQRRNYTNA FHALTRISAD EGVLALWKGC GPTVVRAMAL NMGMLASYDQ SAEYMRDNLG
201: FGEMSTVVGA SAVSGFCAAA CSLPFDFVKT QIQKMQPDAQ GKYPYTGSLD CAMKTLKEGG PLKFYSGFPV YCVRIAPHVM MTWIFLNQIT KFQKKIGM
101: KPLPLYQKAL CGLTAGAIGA CVGSPADLAL IRMQADNTLP LAQRRNYTNA FHALTRISAD EGVLALWKGC GPTVVRAMAL NMGMLASYDQ SAEYMRDNLG
201: FGEMSTVVGA SAVSGFCAAA CSLPFDFVKT QIQKMQPDAQ GKYPYTGSLD CAMKTLKEGG PLKFYSGFPV YCVRIAPHVM MTWIFLNQIT KFQKKIGM
Arabidopsis Description
DTCMitochondrial dicarboxylate/tricarboxylate transporter DTC [Source:UniProtKB/Swiss-Prot;Acc:Q9C5M0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.