Factsheet for Solyc06g066680.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400042642	Potato	cytosol	97.46	97.46
AT1G79900.1	Thale cress	cytosol	69.84	74.32
Solyc03g120100.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion	70.48	74.0
KRH09864	Soybean	cytosol, mitochondrion, plastid	67.94	72.79
KRH23460	Soybean	cytosol, mitochondrion, plastid	67.94	72.54
KRH47042	Soybean	cytosol, mitochondrion, plastid	68.25	70.96
CDY58780	Canola	cytosol, mitochondrion, plastid	69.21	69.87
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	68.57	69.68
Bra035205.1-P	Field mustard	cytosol, mitochondrion, plastid	68.89	69.55
CDX87281	Canola	cytosol, mitochondrion, plastid	68.89	69.55
KRH44361	Soybean	cytosol, mitochondrion, plastid	66.03	68.65
Os01t0225000-00	Rice	cytosol	64.76	63.35
TraesCS3A01G149900.1	Wheat	cytosol	65.08	63.27
TraesCS3B01G177000.1	Wheat	cytosol	64.76	62.96
TraesCS3D01G157800.1	Wheat	cytosol	64.44	62.65
GSMUA_Achr6P14120_001	Banana	cytosol, endoplasmic reticulum, mitochondrion	64.13	62.54
Zm00001d008974_P001	Maize	cytosol	61.9	58.21
KXG31527	Sorghum	cytosol, nucleus, peroxisome	62.22	55.37
Solyc10g079200.1.1	Tomato	plastid	31.43	33.33
Solyc06g061170.2.1	Tomato	plastid	24.13	33.19
Solyc10g009090.2.1	Tomato	extracellular	28.25	29.18
Solyc02g077910.2.1	Tomato	cytosol, endoplasmic reticulum, plastid	23.17	24.33
Solyc09g074370.2.1	Tomato	cytosol	21.59	23.86
Solyc09g031680.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	21.27	22.71
Solyc09g011920.2.1	Tomato	plastid	21.27	21.9
Solyc05g051400.2.1	Tomato	plastid	20.0	20.93
Solyc11g010500.1.1	Tomato	cytosol	20.95	20.37
Solyc05g007730.2.1	Tomato	cytosol	20.32	20.0
Solyc01g005620.2.1	Tomato	plastid	18.73	19.87
Solyc01g021740.1.1	Tomato	cytosol, peroxisome, plastid	5.71	15.38

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0000064	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215
GO:GO:0005290	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006561	GO:GO:0006810	GO:GO:0006839	GO:GO:0006844	GO:GO:0006865
GO:GO:0006950	GO:GO:0006972	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628
GO:GO:0009987	GO:GO:0015171	GO:GO:0015181	GO:GO:0015189	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	GO:GO:0089709	GO:GO:1903352	GO:GO:1903401	GO:GO:1903826	InterPro:IPR018108
InterPro:IPR023395	UniProt:K4C7U3	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF70	SUPFAM:SSF103506	EnsemblPlantsGene:Solyc06g066680.2
EnsemblPlants:Solyc06g066680.2.1	UniParc:UPI0002765F77	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6:-:41894935..41898050

Molecular Weight (calculated)

34856.1 Da

IEP (calculated)

9.745

GRAVY (calculated)

-0.025

Length

315 amino acids

Sequence
(BLAST)

001: MDFWPEFLAS SWGKEFVAGG FGGIAGIVSG YPLDTIRVRQ QSCTPGSAFN ILRRVAATEG PLALYRGMAA PLASVTFQNA MVFQIYAVLS RALDRNVPAS
101: DPPSYKGVAL GGFGTGALQS LMLTPVELVK IRLQLQQRNI LDNKNQMTSC KGPTDVARNI FRQEGWRGIY RGLTITVLRD APAHGLYFWT YEYVREQLHP
201: GCRKNGQESF RTMLIAGGLA GVASWICCYP LDVIKTRFQA QSQSTPLRYT GIVDCFRRSV KQEGYNVLWR GLGTAVARAF VVNGAIFTAY ETALRCLFIN
301: NNKEVHANIQ TENAF

Best Arabidopsis Sequence Match ( AT1G79900.1 )
(BLAST)

001: MDFWPEFMAT SWGREFVAGG FGGVAGIISG YPLDTLRIRQ QQSSKSGSAF SILRRMLAIE GPSSLYRGMA APLASVTFQN AMVFQIYAIF SRSFDSSVPL
101: VEPPSYRGVA LGGVATGAVQ SLLLTPVELI KIRLQLQQTK SGPITLAKSI LRRQGLQGLY RGLTITVLRD APAHGLYFWT YEYVRERLHP GCRKTGQENL
201: RTMLVAGGLA GVASWVACYP LDVVKTRLQQ GHGAYEGIAD CFRKSVKQEG YTVLWRGLGT AVARAFVVNG AIFAAYEVAL RCLFNQSPSP DIVTGD

Arabidopsis Description

BAC2Mitochondrial arginine transporter BAC2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA93]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.