Factsheet for Solyc03g120100.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400014293	Potato	cytosol, mitochondrion, plastid	93.33	94.59
Solyc06g066680.2.1	Tomato	cytosol	74.0	70.48
VIT_09s0002g04500.t01	Wine grape	cytosol, mitochondrion, plastid	68.33	65.92
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	64.0	61.94
TraesCS3A01G149900.1	Wheat	cytosol	62.0	57.41
GSMUA_Achr6P14120_001	Banana	cytosol, endoplasmic reticulum, mitochondrion	61.67	57.28
TraesCS3D01G157800.1	Wheat	cytosol	61.67	57.1
TraesCS3B01G177000.1	Wheat	cytosol	61.67	57.1
Os01t0225000-00	Rice	cytosol	60.67	56.52
Zm00001d008974_P001	Maize	cytosol	58.33	52.24
KXG31527	Sorghum	cytosol, nucleus, peroxisome	58.33	49.44
Solyc06g061170.2.1	Tomato	plastid	24.33	31.88
Solyc10g079200.1.1	Tomato	plastid	31.33	31.65
Solyc10g009090.2.1	Tomato	extracellular	26.33	25.9
Solyc09g074370.2.1	Tomato	cytosol	24.33	25.61
Solyc02g077910.2.1	Tomato	cytosol, endoplasmic reticulum, plastid	23.67	23.67
Solyc09g031680.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	21.0	21.36
Solyc11g010500.1.1	Tomato	cytosol	23.0	21.3
Solyc05g051400.2.1	Tomato	plastid	21.33	21.26
Solyc09g011920.2.1	Tomato	plastid	21.33	20.91
Solyc05g007730.2.1	Tomato	cytosol	22.0	20.62
Solyc01g005620.2.1	Tomato	plastid	19.33	19.53
Solyc01g021740.1.1	Tomato	cytosol, peroxisome, plastid	5.33	13.68

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810
GO:GO:0006839	GO:GO:0006844	GO:GO:0006865	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	UniProt:K4BMF9	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089
PANTHER:PTHR24089:SF649	SUPFAM:SSF103506	EnsemblPlantsGene:Solyc03g120100.2	EnsemblPlants:Solyc03g120100.2.1	UniParc:UPI00027669AA	SEG:seg

Description

No Description!

Coordinates

chr3:-:68589084..68590612

Molecular Weight (calculated)

33020.9 Da

IEP (calculated)

10.273

GRAVY (calculated)

-0.042

Length

300 amino acids

Sequence
(BLAST)

001: MDFWPEFLAS SWGKEFVAGG FGGIAGLISG YPLDSIRVRQ QNSKSGSAFN VFRHVVAKEG PLSLYRGMAA PLASVTFQNA MVFQIYATLS RTFDRKVPVT
101: DPPSYKGVAL GGIAAGAIQS LIISPVELVK IQLQLQSKTN QCNNQVTRLK GPRDVTRRIV SQAGLRGIYR GLTVTVLRDA HSHGLYFWVY DYTKEQLHPG
201: CRKYGQESFQ TMLVAGGLAG SVSWISCYPL DVVKTRLQAQ SQSKSAKYHG IIDCFRQSVR TEGYGVLWRG VGTTVGRAFL VNGTIFTAYE TALRFLCKPQ

Best Arabidopsis Sequence Match ( AT1G79900.1 )
(BLAST)

001: MDFWPEFMAT SWGREFVAGG FGGVAGIISG YPLDTLRIRQ QQSSKSGSAF SILRRMLAIE GPSSLYRGMA APLASVTFQN AMVFQIYAIF SRSFDSSVPL
101: VEPPSYRGVA LGGVATGAVQ SLLLTPVELI KIRLQLQQTK SGPITLAKSI LRRQGLQGLY RGLTITVLRD APAHGLYFWT YEYVRERLHP GCRKTGQENL
201: RTMLVAGGLA GVASWVACYP LDVVKTRLQQ GHGAYEGIAD CFRKSVKQEG YTVLWRGLGT AVARAFVVNG AIFAAYEVAL RCLFNQSPSP DIVTGD

Arabidopsis Description

BAC2Mitochondrial arginine transporter BAC2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA93]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.