Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 2
- golgi 2
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
20363867
plastid: 22908117 plastid: 26371478 nucleus: 28394025 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
22908117
doi
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
msms PMID:
20363867
doi
Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.
msms PMID:
26371478
doi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400052443 | Potato | vacuole | 95.75 | 89.6 |
CDY13183 | Canola | plasma membrane | 76.47 | 83.27 |
Bra003170.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 82.68 | 83.22 |
CDX67588 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 82.68 | 83.22 |
Bra014840.1-P | Field mustard | cytosol, peroxisome, plastid | 82.68 | 82.95 |
CDX76170 | Canola | cytosol, peroxisome, plastid | 82.68 | 82.95 |
CDY51585 | Canola | plasma membrane | 82.35 | 82.89 |
AT3G54110.1 | Thale cress | cytosol, plasma membrane | 82.68 | 82.68 |
Bra007046.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 82.03 | 82.3 |
CDX73508 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 82.03 | 82.3 |
CDX78208 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 82.03 | 82.3 |
GSMUA_Achr9P03550_001 | Banana | cytosol | 81.05 | 81.85 |
GSMUA_Achr6P33850_001 | Banana | cytosol | 79.41 | 80.2 |
Solyc09g031680.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 69.93 | 72.54 |
Solyc05g051400.2.1 | Tomato | plastid | 34.97 | 35.55 |
Solyc11g010500.1.1 | Tomato | cytosol | 36.6 | 34.57 |
Solyc01g005620.2.1 | Tomato | plastid | 31.37 | 32.32 |
Solyc05g007730.2.1 | Tomato | cytosol | 32.03 | 30.62 |
Solyc09g074370.2.1 | Tomato | cytosol | 26.47 | 28.42 |
Solyc01g021740.1.1 | Tomato | cytosol, peroxisome, plastid | 9.8 | 25.64 |
Solyc10g079200.1.1 | Tomato | plastid | 23.53 | 24.24 |
Solyc06g061170.2.1 | Tomato | plastid | 17.65 | 23.58 |
Solyc03g120100.2.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion | 20.91 | 21.33 |
Solyc06g066680.2.1 | Tomato | cytosol | 21.9 | 21.27 |
Solyc10g009090.2.1 | Tomato | extracellular | 20.91 | 20.98 |
Solyc02g077910.2.1 | Tomato | cytosol, endoplasmic reticulum, plastid | 16.67 | 17.0 |
Protein Annotations
Gene3D:1.50.40.10 | MapMan:2.4.2.3 | MapMan:24.2.13 | EMBL:AF472619 | GO:GO:0003333 | GO:GO:0003674 |
GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
GO:GO:0005743 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 | GO:GO:0006839 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009506 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009853 | GO:GO:0009987 |
GO:GO:0015171 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0017077 | GO:GO:0031966 |
GO:GO:1902600 | GO:GO:1990542 | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_uncoupling_UCP-like | InterPro:Mitochondrial_sb/sol_carrier |
InterPro:Mt_carrier_dom_sf | PFAM:PF00153 | PRINTS:PR00784 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF622 |
UniProt:Q8SA58 | SUPFAM:SSF103506 | EnsemblPlantsGene:Solyc09g011920.2 | EnsemblPlants:Solyc09g011920.2.1 | UniParc:UPI00000A8887 | SEG:seg |
Description
Putative uncoupling protein [Source:UniProtKB/TrEMBL;Acc:Q8SA58]
Coordinates
chr9:+:5178746..5183896
Molecular Weight (calculated)
32444.7 Da
IEP (calculated)
9.818
GRAVY (calculated)
0.144
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGDHGGKS DISFAGIFAS SAFAACFAEA CTLPLDTAKV RLQLQKKAVE GDGLGLPKYR GLLGTVGTIA KEEGVASLWK GIVPGLHRQC IYGGLRIGMY
101: EPVKNLYVGK DHVGDVPLSK KILAALTTGA LGITVANPTD LVKVRLQAEG KLPAGVPRRY SGALNAYSTI VKQEGVRALW TGLGPNIGRN AIINAAELAS
201: YDQVKEAVLR IPGFTDNVVT HLIAGLGAGF FAVCIGSPVD VVKSRMMGDS AYKNTLDCFV KTLKNDGPLA FYKGFIPNFG RLGSWNVIMF LTLEQAKKFV
301: KNLESP
101: EPVKNLYVGK DHVGDVPLSK KILAALTTGA LGITVANPTD LVKVRLQAEG KLPAGVPRRY SGALNAYSTI VKQEGVRALW TGLGPNIGRN AIINAAELAS
201: YDQVKEAVLR IPGFTDNVVT HLIAGLGAGF FAVCIGSPVD VVKSRMMGDS AYKNTLDCFV KTLKNDGPLA FYKGFIPNFG RLGSWNVIMF LTLEQAKKFV
301: KNLESP
001: MVAAGKSDLS LPKTFACSAF AACVGEVCTI PLDTAKVRLQ LQKSALAGDV TLPKYRGLLG TVGTIAREEG LRSLWKGVVP GLHRQCLFGG LRIGMYEPVK
101: NLYVGKDFVG DVPLSKKILA GLTTGALGIM VANPTDLVKV RLQAEGKLAA GAPRRYSGAL NAYSTIVRQE GVRALWTGLG PNVARNAIIN AAELASYDQV
201: KETILKIPGF TDNVVTHILS GLGAGFFAVC IGSPVDVVKS RMMGDSGAYK GTIDCFVKTL KSDGPMAFYK GFIPNFGRLG SWNVIMFLTL EQAKKYVREL
301: DASKRN
101: NLYVGKDFVG DVPLSKKILA GLTTGALGIM VANPTDLVKV RLQAEGKLAA GAPRRYSGAL NAYSTIVRQE GVRALWTGLG PNVARNAIIN AAELASYDQV
201: KETILKIPGF TDNVVTHILS GLGAGFFAVC IGSPVDVVKS RMMGDSGAYK GTIDCFVKTL KSDGPMAFYK GFIPNFGRLG SWNVIMFLTL EQAKKYVREL
301: DASKRN
Arabidopsis Description
PUMP1UCP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V8U1]
SUBAcon: [plasma membrane,cytosol]
SUBAcon: [plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.