Factsheet for Bra003170.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

cytosol 2
mitochondrion 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid, secretory
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67588	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	100.0	100.0
CDY51585	Canola	plasma membrane	99.67	99.67
Bra007046.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	98.03	97.7
Bra014840.1-P	Field mustard	cytosol, peroxisome, plastid	94.74	94.43
AT3G54110.1	Thale cress	cytosol, plasma membrane	94.74	94.12
Solyc09g011920.2.1	Tomato	plastid	83.22	82.68
GSMUA_Achr9P03550_001	Banana	cytosol	78.95	79.21
GSMUA_Achr6P33850_001	Banana	cytosol	78.62	78.88
PGSC0003DMT400052443	Potato	vacuole	80.59	74.92
Bra020342.1-P	Field mustard	plasma membrane	68.42	68.87
Bra002603.1-P	Field mustard	cytosol	61.84	57.67
Bra038517.1-P	Field mustard	cytosol	37.17	35.87
Bra030231.1-P	Field mustard	cytosol	37.17	35.65
Bra013815.1-P	Field mustard	cytosol, plasma membrane, plastid	36.84	35.56
Bra026855.1-P	Field mustard	mitochondrion	34.87	34.42
Bra006022.1-P	Field mustard	plasma membrane	35.2	31.94
Bra018517.1-P	Field mustard	cytosol	24.34	29.96
Bra006516.1-P	Field mustard	cytosol	29.28	29.77
Bra034186.1-P	Field mustard	plastid	30.59	29.62
Bra020060.1-P	Field mustard	cytosol	28.29	28.76
Bra002259.1-P	Field mustard	cytosol	24.34	28.57
Bra024994.1-P	Field mustard	cytosol, mitochondrion, plastid	26.97	27.33
Bra022065.1-P	Field mustard	cytosol, mitochondrion, plastid	26.64	27.18
Bra017524.1-P	Field mustard	cytosol, mitochondrion, plastid	26.32	26.67
Bra021881.1-P	Field mustard	cytosol, peroxisome, plastid	20.39	20.39
Bra035205.1-P	Field mustard	cytosol, mitochondrion, plastid	20.72	20.19
Bra005690.1-P	Field mustard	cytosol	23.68	17.87

Protein Annotations

Gene3D:1.50.40.10	MapMan:2.4.2.3	MapMan:24.2.13	EnsemblPlantsGene:Bra003170	EnsemblPlants:Bra003170.1	EnsemblPlants:Bra003170.1-P
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006810
GO:GO:0006839	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0031966	InterPro:IPR018108
InterPro:IPR023395	UniProt:M4CG37	InterPro:Mit_uncoupling_UCP-like	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00784	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF622	SUPFAM:SSF103506	UniParc:UPI00025413CF

Description

AT3G54110 (E=2e-164) ATPUMP1, UCP, PUMP1, ATUCP1, UCP1 | PUMP1 (PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1); binding / oxidative phosphorylation uncoupler

Coordinates

chrA07:+:11673742..11675707

Molecular Weight (calculated)

32656.2 Da

IEP (calculated)

10.084

GRAVY (calculated)

0.143

Length

304 amino acids

Sequence
(BLAST)

001: MVADSKSDLS LPKTFACSAF SACVAEVCTI PLDTAKVRLQ LQKSAIAGDV TLPKYRGLLG TVGTIAREEG LRSLWKGVVP GLHRQCLFGG LRIGMYEPVK
101: NLYVGKDHVG DVPLSKKILA GLTTGALGIM VANPTDLVKV RLQAEGKLAA GVPRRYTGSL NAYSTIVRQE GVRALWTGLG PNVARNAIIN AAELASYDQV
201: KQTILKIPGF TDNVVTHILS GLGAGFFAVC IGSPVDVVKS RMMGDPSYKG TIDCFVKTLK ADGPMAFYKG FIPNFGRLGS WNVIMFLTLE QAKKYVRELE
301: SSKK

Best Arabidopsis Sequence Match ( AT3G54110.1 )
(BLAST)

001: MVAAGKSDLS LPKTFACSAF AACVGEVCTI PLDTAKVRLQ LQKSALAGDV TLPKYRGLLG TVGTIAREEG LRSLWKGVVP GLHRQCLFGG LRIGMYEPVK
101: NLYVGKDFVG DVPLSKKILA GLTTGALGIM VANPTDLVKV RLQAEGKLAA GAPRRYSGAL NAYSTIVRQE GVRALWTGLG PNVARNAIIN AAELASYDQV
201: KETILKIPGF TDNVVTHILS GLGAGFFAVC IGSPVDVVKS RMMGDSGAYK GTIDCFVKTL KSDGPMAFYK GFIPNFGRLG SWNVIMFLTL EQAKKYVREL
301: DASKRN

Arabidopsis Description

PUMP1UCP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V8U1]
SUBAcon: [plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.