Factsheet for Bra013815.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03439	Canola	cytosol, plasma membrane, plastid	99.05	99.05
CDY34292	Canola	cytosol, plasma membrane, plastid	99.05	99.05
AT4G24570.1	Thale cress	cytosol	87.94	88.5
KRH52898	Soybean	cytosol	33.97	78.68
GSMUA_Achr10P...	Banana	mitochondrion	35.56	76.19
KRH62186	Soybean	cytosol	72.38	76.0
VIT_18s0001g07320.t01	Wine grape	cytosol	75.56	73.68
HORVU5Hr1G078970.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	14.29	72.58
Bra038517.1-P	Field mustard	cytosol	71.43	71.43
GSMUA_Achr3P06760_001	Banana	cytosol	60.95	70.85
Bra030231.1-P	Field mustard	cytosol	69.52	69.09
GSMUA_Achr5P17950_001	Banana	cytosol	60.32	68.84
TraesCS5D01G307000.1	Wheat	cytosol	70.16	68.63
EES15143	Sorghum	cytosol	71.11	68.09
HORVU5Hr1G078950.1	Barley	cytosol	70.16	68.0
TraesCS5B01G300300.2	Wheat	cytosol	70.16	68.0
TraesCS5A01G300800.1	Wheat	cytosol	69.84	67.9
Zm00001d031833_P001	Maize	mitochondrion	70.16	67.79
TraesCS5B01G243600.1	Wheat	cytosol	66.03	64.4
TraesCS5D01G252800.1	Wheat	cytosol	65.71	64.09
TraesCS5A01G246300.1	Wheat	cytosol	65.71	64.09
Bra006022.1-P	Field mustard	plasma membrane	61.9	58.21
HORVU5Hr1G069700.1	Barley	plastid	66.35	51.48
Os09t0465400-00	Rice	plastid	64.76	51.13
Bra020342.1-P	Field mustard	plasma membrane	36.83	38.41
Bra002259.1-P	Field mustard	cytosol	31.11	37.84
Bra020060.1-P	Field mustard	cytosol	35.56	37.46
Bra006516.1-P	Field mustard	cytosol	35.56	37.46
Bra003170.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	35.56	36.84
Bra007046.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	35.56	36.72
Bra014840.1-P	Field mustard	cytosol, peroxisome, plastid	33.97	35.08
Bra026855.1-P	Field mustard	mitochondrion	33.65	34.42
Bra018517.1-P	Field mustard	cytosol	23.81	30.36
Bra034186.1-P	Field mustard	plastid	30.16	30.25
Bra002603.1-P	Field mustard	cytosol	31.11	30.06
Bra022065.1-P	Field mustard	cytosol, mitochondrion, plastid	22.54	23.83
Bra021881.1-P	Field mustard	cytosol, peroxisome, plastid	22.54	23.36
Bra017524.1-P	Field mustard	cytosol, mitochondrion, plastid	22.22	23.33
Bra024994.1-P	Field mustard	cytosol, mitochondrion, plastid	21.27	22.33
Bra035205.1-P	Field mustard	cytosol, mitochondrion, plastid	21.9	22.12
Bra005690.1-P	Field mustard	cytosol	24.76	19.35

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EnsemblPlantsGene:Bra013815	EnsemblPlants:Bra013815.1	EnsemblPlants:Bra013815.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005310	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810
GO:GO:0006835	GO:GO:0006839	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
InterPro:IPR018108	InterPro:IPR023395	UniProt:M4DBF5	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF616	SUPFAM:SSF103506
UniParc:UPI0002546469	SEG:seg	:	:	:	:

Description

AT4G24570 (E=9e-136) DIC2 | mitochondrial substrate carrier family protein

Coordinates

chrA01:+:7897694..7898641

Molecular Weight (calculated)

33269.8 Da

IEP (calculated)

10.275

GRAVY (calculated)

0.186

Length

315 amino acids

Sequence
(BLAST)

001: MGVKSFVEGG IASVVAGCST HPLDLIKVRL QLHGEASAVT LLRPALAFHN SPPAFLETTH SVPKVGPISL GINLVKTEGA AALFSGVSAT LLRQTLYSTT
101: RMGLYEVLKN KWTDPESGKL SLTRKIAAGL VGGGIGAAVG NPADVAMVRM QADGRLPVSE RRNYAGVGDA IKRMAKQEGV VSLWRGSALT INRAMIVTAA
201: QLASYDQFKE GMVESGAMKD GLGTHVVASF AAGIVAAVAS NPVDVIKTRV MNMKVEARGG EAQYKGAWDC AVKTVRAEGP MALYKGFVPT VCRQGPFTVV
301: LFVTLEQVKK LLRDF

Best Arabidopsis Sequence Match ( AT4G24570.1 )
(BLAST)

001: MGVKSFVEGG IASVIAGCST HPLDLIKVRL QLHGEAPSTT TVTLLRPALA FPNSSPAAFL ETTSSVPKVG PISLGINIVK SEGAAALFSG VSATLLRQTL
101: YSTTRMGLYE VLKNKWTDPE SGKLNLSRKI GAGLVAGGIG AAVGNPADVA MVRMQADGRL PLAQRRNYAG VGDAIRSMVK GEGVTSLWRG SALTINRAMI
201: VTAAQLASYD QFKEGILENG VMNDGLGTHV VASFAAGFVA SVASNPVDVI KTRVMNMKVG AYDGAWDCAV KTVKAEGAMA LYKGFVPTVC RQGPFTVVLF
301: VTLEQVRKLL RDF

Arabidopsis Description

PUMP4DIC2 [Source:UniProtKB/TrEMBL;Acc:A0A178URN9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.