Factsheet for TraesCS5B01G300300.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G307000.1	Wheat	cytosol	99.08	100.0
TraesCS5A01G300800.1	Wheat	cytosol	98.46	98.77
HORVU5Hr1G078950.1	Barley	cytosol	97.54	97.54
HORVU5Hr1G078970.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	18.15	95.16
VIT_00s0407g00020.t01	Wine grape	mitochondrion	34.77	80.14
KRH52898	Soybean	cytosol	32.62	77.94
GSMUA_Achr5P17950_001	Banana	cytosol	64.92	76.45
TraesCS5B01G243600.1	Wheat	cytosol	75.69	76.16
CDY25603	Canola	cytosol	72.62	74.45
KRH69658	Soybean	cytosol	72.62	74.45
KRH62186	Soybean	cytosol	68.62	74.33
VIT_00s2349g00010.t01	Wine grape	cytosol	72.31	73.9
CDX89481	Canola	cytosol	72.0	73.82
KRH74503	Soybean	cytosol	72.0	73.82
Bra030231.1-P	Field mustard	cytosol	71.38	73.19
KRH45564	Soybean	cytosol	70.46	72.93
CDX76916	Canola	cytosol	70.46	72.7
VIT_18s0001g07320.t01	Wine grape	cytosol	72.0	72.45
AT2G22500.1	Thale cress	cytosol	69.54	72.2
Solyc05g051400.2.1	Tomato	plastid	66.77	72.09
CDY13754	Canola	cytosol	69.85	72.06
PGSC0003DMT400037834	Potato	cytosol	70.15	71.92
Bra038517.1-P	Field mustard	cytosol	69.54	71.75
Solyc11g010500.1.1	Tomato	cytosol	70.15	70.37
PGSC0003DMT400041633	Potato	cytosol	70.15	70.37
AT4G24570.1	Thale cress	cytosol	67.69	70.29
CDY34292	Canola	cytosol, plasma membrane, plastid	68.0	70.16
Bra013815.1-P	Field mustard	cytosol, plasma membrane, plastid	68.0	70.16
CDY03439	Canola	cytosol, plasma membrane, plastid	68.0	70.16
CDX97871	Canola	cytosol	21.23	62.73
CDX81127	Canola	plasma membrane	61.85	60.0
CDY67400	Canola	plasma membrane	61.54	59.7
Bra006022.1-P	Field mustard	plasma membrane	61.23	59.4
AT5G09470.1	Thale cress	extracellular, plasma membrane	61.23	59.05
CDY27701	Canola	cytosol	61.23	58.53
TraesCS3B01G231700.3	Wheat	plasma membrane	33.85	38.46
TraesCS3B01G153900.1	Wheat	golgi	36.0	38.24
TraesCS4B01G139600.1	Wheat	cytosol	35.08	37.5
TraesCS1B01G142400.1	Wheat	cytosol, extracellular, peroxisome	34.46	37.09
TraesCS2B01G335300.1	Wheat	mitochondrion	31.08	33.33
TraesCS1B01G206900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	22.15	24.32
TraesCS1B01G206800.1	Wheat	cytosol, mitochondrion, plastid	22.46	23.32
TraesCS3B01G177000.1	Wheat	cytosol	22.15	22.22
TraesCS4B01G307000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	20.0	21.24
TraesCS5B01G102500.1	Wheat	mitochondrion	19.69	21.05
TraesCS4B01G193900.1	Wheat	plastid	20.62	20.68

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0016020	GO:GO:0031966
InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_uncoupling_UCP-like	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00784	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF616	SUPFAM:SSF103506	EnsemblPlantsGene:TraesCS5B01G300300
EnsemblPlants:TraesCS5B01G300300.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:485154212..485155189

Molecular Weight (calculated)

33986.7 Da

IEP (calculated)

10.711

GRAVY (calculated)

0.193

Length

325 amino acids

Sequence
(BLAST)

001: MGVKGFVEGG IASIVAGCST HPLDLIKVRM QLQGESSAAA AAVPQPALRP ALAFQAGAHT VTLPHAPTPV PKPGPIGICT QILRAEGAAG LFSGISATML
101: RQTLYSTTRM GLYDILKKRW TQENAGVLPL HRKIAAGLIA GGVGAAVGNP ADLAMVRMQA DGRLPLADRR NYRSVGDAIA RMTRDEGVRS LWRGSALTVN
201: RAMIVTASQL ATYDQAKEAI LARRGPAADG LGTHVAASFA AGIVAAAASN PVDVVKTRVM NMKVAPGAPP PYAGALDCAL KTVRSEGVMA LYKGFIPTVS
301: RQGPFTVVLF VTLEQVRKVF KDVEF

Best Arabidopsis Sequence Match ( AT2G22500.1 )
(BLAST)

001: MGLKGFAEGG IASIVAGCST HPLDLIKVRM QLQGESAPIQ TNLRPALAFQ TSTTVNAPPL RVGVIGVGSR LIREEGMRAL FSGVSATVLR QTLYSTTRMG
101: LYDIIKGEWT DPETKTMPLM KKIGAGAIAG AIGAAVGNPA DVAMVRMQAD GRLPLTDRRN YKSVLDAITQ MIRGEGVTSL WRGSSLTINR AMLVTSSQLA
201: SYDSVKETIL EKGLLKDGLG THVSASFAAG FVASVASNPV DVIKTRVMNM KVVAGVAPPY KGAVDCALKT VKAEGIMSLY KGFIPTVSRQ APFTVVLFVT
301: LEQVKKLFKD YDF

Arabidopsis Description

PUMP5Mitochondrial uncoupling protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJY5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.