CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, plasma membrane, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013815.1-P	Field mustard	cytosol, plasma membrane, plastid	99.05	99.05
CDY03439	Canola	cytosol, plasma membrane, plastid	98.1	98.1
AT4G24570.1	Thale cress	cytosol	87.94	88.5
KRH52898	Soybean	cytosol	33.97	78.68
GSMUA_Achr10P...	Banana	mitochondrion	35.56	76.19
KRH62186	Soybean	cytosol	72.38	76.0
VIT_18s0001g07320.t01	Wine grape	cytosol	75.24	73.37
HORVU5Hr1G078970.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	14.29	72.58
CDY13754	Canola	cytosol	71.43	71.43
CDX76916	Canola	cytosol	71.11	71.11
GSMUA_Achr3P06760_001	Banana	cytosol	60.63	70.48
CDY25603	Canola	cytosol	70.48	70.03
CDX89481	Canola	cytosol	70.48	70.03
TraesCS5D01G307000.1	Wheat	cytosol	70.16	68.63
GSMUA_Achr5P17950_001	Banana	cytosol	60.0	68.48
EES15143	Sorghum	cytosol	71.11	68.09
HORVU5Hr1G078950.1	Barley	cytosol	70.16	68.0
TraesCS5B01G300300.2	Wheat	cytosol	70.16	68.0
TraesCS5A01G300800.1	Wheat	cytosol	69.84	67.9
Zm00001d031833_P001	Maize	mitochondrion	70.16	67.79
TraesCS5B01G243600.1	Wheat	cytosol	66.03	64.4
TraesCS5D01G252800.1	Wheat	cytosol	65.71	64.09
TraesCS5A01G246300.1	Wheat	cytosol	65.71	64.09
CDX97871	Canola	cytosol	20.95	60.0
CDY67400	Canola	plasma membrane	62.22	58.51
CDX81127	Canola	plasma membrane	62.22	58.51
CDY27701	Canola	cytosol	62.22	57.65
HORVU5Hr1G069700.1	Barley	plastid	66.35	51.48
Os09t0465400-00	Rice	plastid	64.76	51.13
CDY02849	Canola	plasma membrane	36.83	38.41
CDY32672	Canola	plasma membrane	36.83	38.41
CDX80317	Canola	endoplasmic reticulum, plasma membrane	36.83	38.03
CDX92503	Canola	cytosol	35.87	37.79
CDY35862	Canola	cytosol	35.87	37.79
CDX88877	Canola	cytosol	35.87	37.79
CDY42293	Canola	cytosol	35.87	37.79
CDY44940	Canola	cytosol	35.87	37.79
CDY13183	Canola	plasma membrane	33.02	37.01
CDX67588	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	35.56	36.84
CDY51585	Canola	plasma membrane	35.56	36.84
CDX78208	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	35.56	36.72
CDX73508	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	35.56	36.72
CDX70888	Canola	cytosol, extracellular, plastid	29.52	36.47
CDX76170	Canola	cytosol, peroxisome, plastid	33.97	35.08
CDY33772	Canola	mitochondrion	33.33	34.09
CDY55007	Canola	cytosol, peroxisome, plasma membrane	37.78	32.6
CDX97299	Canola	extracellular	24.44	30.92
CDY21942	Canola	plastid	30.79	30.79
CDY22103	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	30.48	30.57
CDX91241	Canola	cytosol	27.94	30.34
CDX87675	Canola	cytosol, mitochondrion, plastid	22.54	23.83
CDY37683	Canola	cytosol, peroxisome, plastid	22.86	23.68
CDY37150	Canola	cytosol, mitochondrion, plastid	22.54	23.67
CDY11206	Canola	cytosol	25.08	23.37
CDY57210	Canola	cytosol, peroxisome, plastid	22.54	23.36
CDY03190	Canola	cytosol, mitochondrion, plastid	22.22	23.33
CDY35182	Canola	cytosol, mitochondrion, plastid	22.22	23.33
CDX87281	Canola	cytosol, mitochondrion, plastid	22.22	22.44
CDX77693	Canola	cytosol, mitochondrion, plastid	21.27	22.33
CDY58507	Canola	cytosol, mitochondrion, plastid	21.27	22.33
CDY58780	Canola	cytosol, mitochondrion, plastid	21.9	22.12
CDX91242	Canola	extracellular	1.27	21.05
CDX80777	Canola	cytosol	24.44	18.97

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:A0A078H9F4	UniProt:A0A078H9F4	EnsemblPlants:CDY34292	ProteinID:CDY34292
ProteinID:CDY34292.1	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00056325001	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF616
SUPFAM:SSF103506	UniParc:UPI0004EEED28	SEG:seg	:	:	:

Description

BnaA01g13950DBnaA01g13950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9F4]

Coordinates

chrLK032332:+:169259..170316

Molecular Weight (calculated)

33253.8 Da

IEP (calculated)

10.275

GRAVY (calculated)

0.186

Length

315 amino acids

Sequence
(BLAST)

001: MGVKSFVEGG IASVVAGCST HPLDLIKVRL QLHGEASAVT LLRPALAFHN SPPAFLETTH SVPKVGPISL GINLVKTEGA AALFSGVSAT LLRQTLYSTT
101: RMGLYEVLKN KWTDPESGKL SLTRKIAAGL VGGGIGAALG NPADVAMVRM QADGRLPVAE RRNYAGVGDA IKRMAKQEGV VSLWRGSALT INRAMIVTAA
201: QLASYDQFKE GMVESGGMKD GLGTHVVASF AAGIVAAVAS NPVDVIKTRV MNMKVEARGG EAQYKGAWDC AVKTVRAEGP MALYKGFVPT VCRQGPFTVV
301: LFVTLEQVKK LLRDF

Best Arabidopsis Sequence Match ( AT4G24570.1 )
(BLAST)

001: MGVKSFVEGG IASVIAGCST HPLDLIKVRL QLHGEAPSTT TVTLLRPALA FPNSSPAAFL ETTSSVPKVG PISLGINIVK SEGAAALFSG VSATLLRQTL
101: YSTTRMGLYE VLKNKWTDPE SGKLNLSRKI GAGLVAGGIG AAVGNPADVA MVRMQADGRL PLAQRRNYAG VGDAIRSMVK GEGVTSLWRG SALTINRAMI
201: VTAAQLASYD QFKEGILENG VMNDGLGTHV VASFAAGFVA SVASNPVDVI KTRVMNMKVG AYDGAWDCAV KTVKAEGAMA LYKGFVPTVC RQGPFTVVLF
301: VTLEQVRKLL RDF

Arabidopsis Description

PUMP4DIC2 [Source:UniProtKB/TrEMBL;Acc:A0A178URN9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.