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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid, secretory
Any Predictor:cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:mitochondrion
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007046.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 100.0 100.0
CDX73508 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 100.0 100.0
CDX67588 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 97.7 98.03
CDY51585 Canola plasma membrane 97.38 97.7
CDX76170 Canola cytosol, peroxisome, plastid 94.43 94.43
AT3G54110.1 Thale cress cytosol, plasma membrane 94.43 94.12
CDY13183 Canola plasma membrane 86.23 93.59
Solyc09g011920.2.1 Tomato plastid 82.3 82.03
GSMUA_Achr9P03550_001 Banana cytosol 78.36 78.88
GSMUA_Achr6P33850_001 Banana cytosol 78.03 78.55
PGSC0003DMT400052443 Potato vacuole 80.0 74.62
CDX80317 Canola endoplasmic reticulum, plasma membrane 69.51 69.51
CDY32672 Canola plasma membrane 68.2 68.87
CDY02849 Canola plasma membrane 68.2 68.87
CDY55007 Canola cytosol, peroxisome, plasma membrane 69.84 58.36
CDX76916 Canola cytosol 37.7 36.51
CDY25603 Canola cytosol 37.7 36.28
CDX89481 Canola cytosol 37.7 36.28
CDY13754 Canola cytosol 37.38 36.19
CDY03439 Canola cytosol, plasma membrane, plastid 37.05 35.87
CDY34292 Canola cytosol, plasma membrane, plastid 36.72 35.56
CDY33772 Canola mitochondrion 34.43 34.09
CDX97871 Canola cytosol 12.13 33.64
CDY67400 Canola plasma membrane 35.74 32.54
CDX81127 Canola plasma membrane 35.74 32.54
CDX97299 Canola extracellular 24.26 29.72
CDY27701 Canola cytosol 33.11 29.71
CDX91241 Canola cytosol 28.2 29.66
CDX88877 Canola cytosol 28.52 29.1
CDY22103 Canola cytosol, endoplasmic reticulum, peroxisome, plastid 29.51 28.66
CDX92503 Canola cytosol 27.87 28.43
CDY35862 Canola cytosol 27.87 28.43
CDY44940 Canola cytosol 27.87 28.43
CDY42293 Canola cytosol 27.87 28.43
CDY21942 Canola plastid 29.18 28.25
CDX77693 Canola cytosol, mitochondrion, plastid 27.21 27.67
CDY58507 Canola cytosol, mitochondrion, plastid 27.21 27.67
CDX87675 Canola cytosol, mitochondrion, plastid 26.56 27.18
CDY37150 Canola cytosol, mitochondrion, plastid 26.56 27.0
CDY03190 Canola cytosol, mitochondrion, plastid 26.56 27.0
CDY35182 Canola cytosol, mitochondrion, plastid 26.23 26.67
CDX70888 Canola cytosol, extracellular, plastid 20.98 25.1
CDY11206 Canola cytosol 23.93 21.6
CDY58780 Canola cytosol, mitochondrion, plastid 20.98 20.51
CDX87281 Canola cytosol, mitochondrion, plastid 20.98 20.51
CDY37683 Canola cytosol, peroxisome, plastid 20.33 20.39
CDY57210 Canola cytosol, peroxisome, plastid 20.33 20.39
CDX80777 Canola cytosol 23.61 17.73
CDX91242 Canola extracellular 0.98 15.79
Protein Annotations
Gene3D:1.50.40.10MapMan:2.4.2.3MapMan:24.2.13GO:A0A078CEZ3EnsemblPlants:CDX78208ProteinID:CDX78208
ProteinID:CDX78208.1GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
GO:GO:0006810GO:GO:0006839GO:GO:0008150GO:GO:0016020GO:GO:0031966EnsemblPlantsGene:GSBRNA2T00129525001
InterPro:IPR018108InterPro:IPR023395InterPro:Mit_uncoupling_UCP-likeInterPro:Mitochondrial_sb/sol_carrierInterPro:Mt_carrier_dom_sfPFAM:PF00153
PRINTS:PR00784PFscan:PS50920PANTHER:PTHR24089PANTHER:PTHR24089:SF622SUPFAM:SSF103506UniParc:UPI000254289F
Description
BnaA09g34030D
Coordinates
chrLK031814:+:1777285..1779883
Molecular Weight (calculated)
32761.3 Da
IEP (calculated)
10.072
GRAVY (calculated)
0.125
Length
305 amino acids
Sequence
(BLAST)
001: MVADSKSDLS LPKTFACSAF AACVGEVCTI PLDTAKVRLQ LQKSAIAGDV TLPKYRGLLG TVGTIAREEG LRSLWKGVVP GLHRQCLFGG LRIGMYEPVK
101: NLYVGKDHVG DVPLSKKILA GLTTGALGIM VANPTDLVKV RLQAEGKLPA GVPKRYTGSL NAYSTIVRQE GVRALWTGLG PNVARNAIIN AAELASYDQV
201: KQTILKIPGF TDNIVTHILS GLGAGFFAVC IGSPVDVVKS RMMGDPSYKG TIDCFVKTLK ADGPMAFYKG FIPNFGRLGS WNVIMFLTLE QAKKYVRELD
301: SSKKH
Best Arabidopsis Sequence Match ( AT3G54110.1 )
(BLAST)
001: MVAAGKSDLS LPKTFACSAF AACVGEVCTI PLDTAKVRLQ LQKSALAGDV TLPKYRGLLG TVGTIAREEG LRSLWKGVVP GLHRQCLFGG LRIGMYEPVK
101: NLYVGKDFVG DVPLSKKILA GLTTGALGIM VANPTDLVKV RLQAEGKLAA GAPRRYSGAL NAYSTIVRQE GVRALWTGLG PNVARNAIIN AAELASYDQV
201: KETILKIPGF TDNVVTHILS GLGAGFFAVC IGSPVDVVKS RMMGDSGAYK GTIDCFVKTL KSDGPMAFYK GFIPNFGRLG SWNVIMFLTL EQAKKYVREL
301: DASKRN
Arabidopsis Description
PUMP1UCP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V8U1]
SUBAcon: [plasma membrane,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.