Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002259.1-P | Field mustard | cytosol | 86.29 | 99.61 |
| CDY35862 | Canola | cytosol | 99.33 | 99.33 |
| CDY42293 | Canola | cytosol | 97.99 | 97.99 |
| CDY44940 | Canola | cytosol | 97.66 | 97.66 |
| CDX88877 | Canola | cytosol | 96.66 | 96.66 |
| AT5G19760.1 | Thale cress | cytosol | 93.31 | 93.62 |
| CDX70888 | Canola | cytosol, extracellular, plastid | 77.93 | 91.37 |
| Solyc01g005620.2.1 | Tomato | plastid | 85.95 | 86.53 |
| PGSC0003DMT400081953 | Potato | cytosol, peroxisome, plastid | 84.95 | 85.52 |
| KRH42853 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 85.28 | 84.72 |
| GSMUA_Achr9P28780_001 | Banana | cytosol, peroxisome, plastid | 84.62 | 84.62 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plastid | 84.62 | 84.62 |
| GSMUA_Achr6P14540_001 | Banana | cytosol, mitochondrion, plastid | 84.28 | 84.28 |
| GSMUA_Achr10P... | Banana | cytosol, peroxisome, plastid | 83.95 | 83.95 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 83.95 | 83.67 |
| Os05t0208000-01 | Rice | cytosol, extracellular, peroxisome | 85.28 | 83.33 |
| TraesCS1A01G124600.1 | Wheat | golgi, unclear | 83.61 | 82.78 |
| TraesCS1D01G129200.2 | Wheat | cytosol, extracellular, peroxisome | 83.61 | 82.78 |
| TraesCS1B01G142400.1 | Wheat | cytosol, extracellular, peroxisome | 83.61 | 82.78 |
| HORVU1Hr1G028720.1 | Barley | cytosol, extracellular, peroxisome | 82.94 | 82.12 |
| EES17872 | Sorghum | cytosol, extracellular, peroxisome, plastid | 83.61 | 81.17 |
| Zm00001d037725_P001 | Maize | plastid | 83.61 | 81.17 |
| HORVU3Hr1G025820.1 | Barley | plasma membrane | 82.94 | 81.05 |
| Os11t0432400-01 | Rice | cytosol | 83.61 | 80.91 |
| TraesCS3B01G153900.1 | Wheat | golgi | 82.27 | 80.39 |
| Zm00001d037727_P001 | Maize | plastid | 83.61 | 80.39 |
| TraesCS3D01G136800.1 | Wheat | golgi | 82.27 | 80.13 |
| TraesCS3A01G135800.1 | Wheat | cytosol | 81.61 | 79.74 |
| VIT_06s0004g00470.t01 | Wine grape | cytosol | 82.61 | 71.59 |
| CDY34292 | Canola | cytosol, plasma membrane, plastid | 37.79 | 35.87 |
| CDY03439 | Canola | cytosol, plasma membrane, plastid | 37.46 | 35.56 |
| CDY25603 | Canola | cytosol | 35.12 | 33.12 |
| CDY13754 | Canola | cytosol | 34.78 | 33.02 |
| CDX89481 | Canola | cytosol | 34.78 | 32.81 |
| CDX76916 | Canola | cytosol | 34.45 | 32.7 |
| CDX81127 | Canola | plasma membrane | 36.45 | 32.54 |
| CDY67400 | Canola | plasma membrane | 36.12 | 32.24 |
| CDX97871 | Canola | cytosol | 11.37 | 30.91 |
| CDY33772 | Canola | mitochondrion | 31.44 | 30.52 |
| CDY13183 | Canola | plasma membrane | 28.09 | 29.89 |
| CDY32672 | Canola | plasma membrane | 29.77 | 29.47 |
| CDY02849 | Canola | plasma membrane | 29.77 | 29.47 |
| CDX67588 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 29.1 | 28.62 |
| CDY51585 | Canola | plasma membrane | 29.1 | 28.62 |
| CDX80317 | Canola | endoplasmic reticulum, plasma membrane | 29.1 | 28.52 |
| CDX73508 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 28.43 | 27.87 |
| CDX78208 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 28.43 | 27.87 |
| CDX76170 | Canola | cytosol, peroxisome, plastid | 27.76 | 27.21 |
| CDY27701 | Canola | cytosol | 29.43 | 25.88 |
| CDY21942 | Canola | plastid | 26.42 | 25.08 |
| CDY22103 | Canola | cytosol, endoplasmic reticulum, peroxisome, plastid | 26.09 | 24.84 |
| CDY55007 | Canola | cytosol, peroxisome, plasma membrane | 30.1 | 24.66 |
| CDX97299 | Canola | extracellular | 20.4 | 24.5 |
| CDX91241 | Canola | cytosol | 22.74 | 23.45 |
| CDY03190 | Canola | cytosol, mitochondrion, plastid | 22.74 | 22.67 |
| CDX87675 | Canola | cytosol, mitochondrion, plastid | 22.41 | 22.48 |
| CDY37150 | Canola | cytosol, mitochondrion, plastid | 22.41 | 22.33 |
| CDY35182 | Canola | cytosol, mitochondrion, plastid | 22.41 | 22.33 |
| CDY58507 | Canola | cytosol, mitochondrion, plastid | 21.74 | 21.67 |
| CDX77693 | Canola | cytosol, mitochondrion, plastid | 21.4 | 21.33 |
| CDX91242 | Canola | extracellular | 1.34 | 21.05 |
| CDY11206 | Canola | cytosol | 22.41 | 19.82 |
| CDY37683 | Canola | cytosol, peroxisome, plastid | 18.39 | 18.09 |
| CDY57210 | Canola | cytosol, peroxisome, plastid | 18.06 | 17.76 |
| CDX87281 | Canola | cytosol, mitochondrion, plastid | 18.39 | 17.63 |
| CDY58780 | Canola | cytosol, mitochondrion, plastid | 18.06 | 17.31 |
| CDX80777 | Canola | cytosol | 22.74 | 16.75 |
Protein Annotations
| EnsemblPlants:CDX92503 | EnsemblPlantsGene:GSBRNA2T00154281001 | Gene3D:1.50.40.10 | GO:A0A078DYY4 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0055085 | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf |
| PANTHER:PTHR24089 | PANTHER:PTHR24089:SF427 | PFAM:PF00153 | PFscan:PS50920 | PRINTS:PR00926 | ProteinID:CDX92503 |
| ProteinID:CDX92503.1 | SUPFAM:SSF103506 | UniParc:UPI0004EEF455 | MapMan:5.1.1.1 | MapMan:24.2.13 | : |
Description
BnaA10g15420D
Coordinates
chrLK031872:+:975158..977036
Molecular Weight (calculated)
31925.2 Da
IEP (calculated)
9.561
GRAVY (calculated)
0.141
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEKKVAPT GVWTAVKPFV NGGASGMLAT CVIQPIDMIK VRIQLGQGSA VSVTKNMLKN DGIGAFYKGL SAGLLRQATY TTARLGSFKM LTAKAIEAND
101: GKPLPLYQKA LCGLTAGAIG ACVGSPADLA LIRMQADNTL PLAQRRNYTN AFHALYRISA DEGVLALWKG CGPTVVRAMA LNMGMLASYD QSAEYMRDNL
201: GLGETSTVVG ASAVSGFCAA ACSLPFDYVK TQIQKMQPDA QGKYPYTGSL DCAMQTLKSG GPLKFYTGFP VYCVRIAPHV MMTWIFLNQI TKFQKTIGL
101: GKPLPLYQKA LCGLTAGAIG ACVGSPADLA LIRMQADNTL PLAQRRNYTN AFHALYRISA DEGVLALWKG CGPTVVRAMA LNMGMLASYD QSAEYMRDNL
201: GLGETSTVVG ASAVSGFCAA ACSLPFDYVK TQIQKMQPDA QGKYPYTGSL DCAMQTLKSG GPLKFYTGFP VYCVRIAPHV MMTWIFLNQI TKFQKTIGL
001: MAEEKKAPIS VWTTVKPFVN GGASGMLATC VIQPIDMIKV RIQLGQGSAA SITTNMLKNE GVGAFYKGLS AGLLRQATYT TARLGSFKLL TAKAIESNDG
101: KPLPLYQKAL CGLTAGAIGA CVGSPADLAL IRMQADNTLP LAQRRNYTNA FHALTRISAD EGVLALWKGC GPTVVRAMAL NMGMLASYDQ SAEYMRDNLG
201: FGEMSTVVGA SAVSGFCAAA CSLPFDFVKT QIQKMQPDAQ GKYPYTGSLD CAMKTLKEGG PLKFYSGFPV YCVRIAPHVM MTWIFLNQIT KFQKKIGM
101: KPLPLYQKAL CGLTAGAIGA CVGSPADLAL IRMQADNTLP LAQRRNYTNA FHALTRISAD EGVLALWKGC GPTVVRAMAL NMGMLASYDQ SAEYMRDNLG
201: FGEMSTVVGA SAVSGFCAAA CSLPFDFVKT QIQKMQPDAQ GKYPYTGSLD CAMKTLKEGG PLKFYSGFPV YCVRIAPHVM MTWIFLNQIT KFQKKIGM
Arabidopsis Description
DTCMitochondrial dicarboxylate/tricarboxylate transporter DTC [Source:UniProtKB/Swiss-Prot;Acc:Q9C5M0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.