CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97299	Canola	extracellular	69.66	81.12
CDY22103	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	82.76	76.43
CDY21942	Canola	plastid	82.07	75.56
AT4G03115.3	Thale cress	cytosol	82.07	68.79
KRH71523	Soybean	plastid	60.34	55.2
VIT_07s0104g01160.t01	Wine grape	cytosol	58.97	54.98
TraesCS5D01G109300.2	Wheat	plastid	55.17	53.87
Os12t0533800-01	Rice	endoplasmic reticulum, extracellular	41.03	51.52
HORVU5Hr1G026160.2	Barley	mitochondrion, plastid	53.45	51.49
Solyc09g074370.2.1	Tomato	cytosol	50.0	50.88
KXG23597	Sorghum	mitochondrion	52.07	50.67
Zm00001d023895_P007	Maize	mitochondrion	51.38	50.0
GSMUA_Achr1P14700_001	Banana	cytosol	56.9	47.55
PGSC0003DMT400043390	Potato	cytosol, plastid	60.69	42.21
TraesCS5A01G096600.1	Wheat	mitochondrion, plastid	41.38	39.6
TraesCS5B01G102500.1	Wheat	mitochondrion	41.03	39.14
CDY13183	Canola	plasma membrane	28.62	29.54
CDY02849	Canola	plasma membrane	30.34	29.14
CDX67588	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	30.34	28.95
CDY51585	Canola	plasma membrane	30.34	28.95
CDY32672	Canola	plasma membrane	30.0	28.81
CDX73508	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.66	28.2
CDX76170	Canola	cytosol, peroxisome, plastid	29.66	28.2
CDX78208	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.66	28.2
CDY34292	Canola	cytosol, plasma membrane, plastid	30.34	27.94
CDX80317	Canola	endoplasmic reticulum, plasma membrane	29.31	27.87
CDX89481	Canola	cytosol	30.34	27.76
CDY25603	Canola	cytosol	30.34	27.76
CDY03439	Canola	cytosol, plasma membrane, plastid	30.0	27.62
CDY13754	Canola	cytosol	30.0	27.62
CDX76916	Canola	cytosol	29.31	26.98
CDX97871	Canola	cytosol	10.0	26.36
CDX81127	Canola	plasma membrane	30.34	26.27
CDY67400	Canola	plasma membrane	30.34	26.27
CDY55007	Canola	cytosol, peroxisome, plasma membrane	29.66	23.56
CDX88877	Canola	cytosol	23.79	23.08
CDY33772	Canola	mitochondrion	24.48	23.05
CDY42293	Canola	cytosol	23.45	22.74
CDY44940	Canola	cytosol	23.45	22.74
CDX92503	Canola	cytosol	23.45	22.74
CDY35862	Canola	cytosol	23.45	22.74
CDY27701	Canola	cytosol	26.21	22.35
CDY58507	Canola	cytosol, mitochondrion, plastid	22.76	22.0
CDX77693	Canola	cytosol, mitochondrion, plastid	22.41	21.67
CDY35182	Canola	cytosol, mitochondrion, plastid	22.07	21.33
CDY03190	Canola	cytosol, mitochondrion, plastid	22.07	21.33
CDY11206	Canola	cytosol	24.83	21.3
CDX87675	Canola	cytosol, mitochondrion, plastid	21.72	21.14
CDY37150	Canola	cytosol, mitochondrion, plastid	21.72	21.0
CDY58780	Canola	cytosol, mitochondrion, plastid	22.41	20.83
CDX87281	Canola	cytosol, mitochondrion, plastid	22.41	20.83
CDX70888	Canola	cytosol, extracellular, plastid	17.24	19.61
CDX80777	Canola	cytosol	24.48	17.49
CDY37683	Canola	cytosol, peroxisome, plastid	16.55	15.79
CDX91242	Canola	extracellular	1.03	15.79
CDY57210	Canola	cytosol, peroxisome, plastid	16.21	15.46

Protein Annotations

EnsemblPlants:CDX91241	EnsemblPlantsGene:GSBRNA2T00152438001	Gene3D:1.50.40.10	GO:A0A078DPU5	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089	PANTHER:PTHR24089:SF664	PFAM:PF00153	PFscan:PS50920
ProteinID:CDX91241	ProteinID:CDX91241.1	SUPFAM:SSF103506	UniParc:UPI0004EDAEBC	MapMan:24.2.13	:

Description

BnaC02g26520D

Coordinates

chrLK031866:+:476687..478920

Molecular Weight (calculated)

31314.8 Da

IEP (calculated)

10.458

GRAVY (calculated)

0.177

Length

290 amino acids

Sequence
(BLAST)

001: MIGDISPPDA LIPVVEGKAE VRKTKNLLPP LSAVASHFGT SGLSVALATG VTHPLDVLKV RLQMQHVGLG QRGPVIGMTG ILLQLRKNEG PRSLYLGLTP
101: ALTRSVLYGG LRLGLYEPTK VSFDWAFGST TVLVKIASRA FAGAFSTALT NPVEVVKVRL QMNPNAVPMA QVREIVSKGG IGALWKGFGP AMVRSAALTA
201: SQLATYDETK RILVTQTSLE EGFIFIYGVV STLITAPMDM IKTRLMMQHD SGSSRIYRNG FHCGYKVVRK EGPMALYKGL DKKISFLEDI

Best Arabidopsis Sequence Match ( AT4G03115.1 )
(BLAST)

001: MIGDISPPVT SIPVVEGNEE LRKPQNLIPP FSKVVSHFGI SGISVALATG VTHPLDVVKV RLQMQHVGQR GPLIGMTGIF LQLMKNEGRR SLYLGLTPAL
101: TRSVLYGGLR LGLYEPTKVS FDWAFGSTNV LVKIASGAFA GAFSTALTNP VEVVKVRLQM NPNAVPIAEV REIVSKEGIG ALWKGVGPAM VRAAALTASQ
201: LATYDEAKRI LVKRTSLEEG FHLHLCSSVV AGLVSTLITA PMDMIKTRLM LQQGSESTKT YRNGFHCGYK VVRKEGPLAL YKGGFAIFAR LGPQTMITFI
301: LCEKLRSLAG LHTM

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT4G03115]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.