Factsheet for TraesCS5D01G109300.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G026160.2	Barley	mitochondrion, plastid	97.64	96.35
KXG23597	Sorghum	mitochondrion	84.18	83.89
Zm00001d023895_P007	Maize	mitochondrion	82.15	81.88
Os12t0533800-01	Rice	endoplasmic reticulum, extracellular	58.59	75.32
VIT_07s0104g01160.t01	Wine grape	cytosol	70.37	67.2
TraesCS5A01G096600.1	Wheat	mitochondrion, plastid	65.66	64.36
TraesCS5B01G102500.1	Wheat	mitochondrion	65.32	63.82
GSMUA_Achr1P14700_001	Banana	cytosol	74.41	63.69
Solyc09g074370.2.1	Tomato	cytosol	60.27	62.81
Bra034186.1-P	Field mustard	plastid	64.98	61.47
CDY22103	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	64.65	61.15
KRH71523	Soybean	plastid	64.98	60.88
CDY21942	Canola	plastid	63.64	60.0
CDX91242	Canola	extracellular	3.7	57.89
CDX91241	Canola	cytosol	53.87	55.17
CDX97299	Canola	extracellular	46.13	55.02
AT4G03115.3	Thale cress	cytosol	63.97	54.91
Bra018517.1-P	Field mustard	cytosol	45.45	54.66
PGSC0003DMT400043390	Potato	cytosol, plastid	67.34	47.96
TraesCS3D01G204800.2	Wheat	plasma membrane	29.97	31.12
TraesCS4D01G134300.1	Wheat	golgi	31.31	30.59
TraesCS5D01G252800.1	Wheat	cytosol	33.0	30.34
TraesCS2D01G315000.1	Wheat	plastid	30.3	29.8
TraesCS5D01G307000.1	Wheat	cytosol	31.99	29.5
TraesCS1D01G129200.2	Wheat	cytosol, extracellular, peroxisome	24.92	24.5
TraesCS1D01G195500.1	Wheat	golgi	24.24	24.32
TraesCS4D01G194800.1	Wheat	plastid	26.6	24.23
TraesCS3D01G136800.1	Wheat	golgi	24.24	23.45
TraesCS3D01G157800.1	Wheat	cytosol	24.58	22.53
TraesCS4D01G305200.1	Wheat	cytosol	21.21	20.59
TraesCS1D01G195400.1	Wheat	golgi	22.56	19.03

Protein Annotations

EnsemblPlants:TraesCS5D01G109300.2	EnsemblPlantsGene:TraesCS5D01G109300	Gene3D:1.50.40.10	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089	PANTHER:PTHR24089:SF664	PFAM:PF00153	PFscan:PS50920	SEG:seg
SUPFAM:SSF103506	TMHMM:TMhelix	MapMan:24.2.13	:	:	:

Description

No Description!

Coordinates

chr5D:+:123452183..123460478

Molecular Weight (calculated)

31750.1 Da

IEP (calculated)

9.903

GRAVY (calculated)

0.239

Length

297 amino acids

Sequence
(BLAST)

001: MSGDARSPPR GGAPYALYQF GTSGAAVAVA TAVTHPLDVI KIRLQMQLAG QRGNLVGMGA IFTQMVEREG PRSLYLGFAP ALTRSLIYGG LRLGLYEPCK
101: HVCSYAFGST NFAFKFASGV VAGALATALT NPMEVLKVRS QMSTSRISTI GVMREIVSEE GVKALWKGVG PAMVRAGCLT ASQMATYDEA KQVLLMWTPL
201: EEGFQLHLMS SCIAGTAGTL VTAPIDMIKT RLMLQRESKG ARVYRNGFHC AYQVVLTEGV KALYKGGFAT FARLGPQTAI TFVACEKLRE LAGMSAI

Best Arabidopsis Sequence Match ( AT4G03115.1 )
(BLAST)

001: MIGDISPPVT SIPVVEGNEE LRKPQNLIPP FSKVVSHFGI SGISVALATG VTHPLDVVKV RLQMQHVGQR GPLIGMTGIF LQLMKNEGRR SLYLGLTPAL
101: TRSVLYGGLR LGLYEPTKVS FDWAFGSTNV LVKIASGAFA GAFSTALTNP VEVVKVRLQM NPNAVPIAEV REIVSKEGIG ALWKGVGPAM VRAAALTASQ
201: LATYDEAKRI LVKRTSLEEG FHLHLCSSVV AGLVSTLITA PMDMIKTRLM LQQGSESTKT YRNGFHCGYK VVRKEGPLAL YKGGFAIFAR LGPQTMITFI
301: LCEKLRSLAG LHTM

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT4G03115]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.