CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
mitochondrion 2
extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	extracellular, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018517.1-P	Field mustard	cytosol	96.79	97.57
CDX91241	Canola	cytosol	81.12	69.66
CDY22103	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	75.9	60.19
CDY21942	Canola	plastid	74.3	58.73
AT4G03115.3	Thale cress	cytosol	76.71	55.2
VIT_07s0104g01160.t01	Wine grape	cytosol	59.04	47.27
KRH71523	Soybean	plastid	59.84	47.0
TraesCS5D01G109300.2	Wheat	plastid	55.02	46.13
HORVU5Hr1G026160.2	Barley	mitochondrion, plastid	53.41	44.19
KXG23597	Sorghum	mitochondrion	52.21	43.62
Zm00001d023895_P007	Maize	mitochondrion	51.41	42.95
Os12t0533800-01	Rice	endoplasmic reticulum, extracellular	37.75	40.69
Solyc09g074370.2.1	Tomato	cytosol	45.78	40.0
GSMUA_Achr1P14700_001	Banana	cytosol	54.22	38.9
PGSC0003DMT400043390	Potato	cytosol, plastid	56.63	33.81
TraesCS5A01G096600.1	Wheat	mitochondrion, plastid	39.36	32.34
TraesCS5B01G102500.1	Wheat	mitochondrion	39.36	32.24
CDX97871	Canola	cytosol	13.25	30.0
CDY13183	Canola	plasma membrane	28.92	25.62
CDY25603	Canola	cytosol	31.73	24.92
CDX89481	Canola	cytosol	31.73	24.92
CDY13754	Canola	cytosol	31.33	24.76
CDX76170	Canola	cytosol, peroxisome, plastid	30.12	24.59
CDY02849	Canola	plasma membrane	29.72	24.5
CDX76916	Canola	cytosol	30.92	24.44
CDY34292	Canola	cytosol, plasma membrane, plastid	30.92	24.44
CDY51585	Canola	plasma membrane	29.72	24.34
CDX67588	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.72	24.34
CDX78208	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.72	24.26
CDX73508	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.72	24.26
CDY32672	Canola	plasma membrane	29.32	24.17
CDY03439	Canola	cytosol, plasma membrane, plastid	30.52	24.13
CDX80317	Canola	endoplasmic reticulum, plasma membrane	28.92	23.61
CDX81127	Canola	plasma membrane	30.92	22.99
CDY67400	Canola	plasma membrane	30.92	22.99
CDX88877	Canola	cytosol	24.9	20.74
CDY35862	Canola	cytosol	24.5	20.4
CDY44940	Canola	cytosol	24.5	20.4
CDY42293	Canola	cytosol	24.5	20.4
CDX92503	Canola	cytosol	24.5	20.4
CDY33772	Canola	mitochondrion	24.9	20.13
CDY27701	Canola	cytosol	27.31	20.0
CDY55007	Canola	cytosol, peroxisome, plasma membrane	28.92	19.73
CDX87281	Canola	cytosol, mitochondrion, plastid	23.69	18.91
CDY58780	Canola	cytosol, mitochondrion, plastid	23.69	18.91
CDX77693	Canola	cytosol, mitochondrion, plastid	22.49	18.67
CDY58507	Canola	cytosol, mitochondrion, plastid	22.49	18.67
CDY11206	Canola	cytosol	25.3	18.64
CDX87675	Canola	cytosol, mitochondrion, plastid	21.69	18.12
CDY37150	Canola	cytosol, mitochondrion, plastid	21.69	18.0
CDY35182	Canola	cytosol, mitochondrion, plastid	21.69	18.0
CDY03190	Canola	cytosol, mitochondrion, plastid	21.69	18.0
CDX70888	Canola	cytosol, extracellular, plastid	17.67	17.25
CDX91242	Canola	extracellular	1.2	15.79
CDX80777	Canola	cytosol	24.5	15.02
CDY37683	Canola	cytosol, peroxisome, plastid	17.67	14.47
CDY57210	Canola	cytosol, peroxisome, plastid	17.27	14.14

Protein Annotations

EnsemblPlants:CDX97299	EnsemblPlantsGene:GSBRNA2T00104350001	Gene3D:1.50.40.10	GO:A0A078E982	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089	PANTHER:PTHR24089:SF664	PFAM:PF00153	PFscan:PS50920
ProteinID:CDX97299	ProteinID:CDX97299.1	SUPFAM:SSF103506	UniParc:UPI0004EE8D10	MapMan:24.2.13	:

Description

BnaA02g20900D

Coordinates

chrLK031898:-:705282..706477

Molecular Weight (calculated)

27150.6 Da

IEP (calculated)

9.751

GRAVY (calculated)

0.295

Length

249 amino acids

Sequence
(BLAST)

001: MVSLLVCVFR CIERRIADAA CWTKSPLIGM TGIFLQLLKN EGPRSLYLGL TPSLTRSGFY GGLRLGLYEP TKVSFDWAFG STTVLVKIAS GEFAGAFSTA
101: LTNPVEVVKV RLQMNPNAVP MAQVREIVSI GGIGALWKGF GPAMVRAAAL TASQLATYDE TKRILVIQTS LEEGFHLHLC SSVVAGVVST LITASMDMIK
201: TRLMMMHHDS GSSRIYKNGF HCGYKVVRKE GSMALYKGLD KKISFLEDI

Best Arabidopsis Sequence Match ( AT4G03115.1 )
(BLAST)

001: MIGDISPPVT SIPVVEGNEE LRKPQNLIPP FSKVVSHFGI SGISVALATG VTHPLDVVKV RLQMQHVGQR GPLIGMTGIF LQLMKNEGRR SLYLGLTPAL
101: TRSVLYGGLR LGLYEPTKVS FDWAFGSTNV LVKIASGAFA GAFSTALTNP VEVVKVRLQM NPNAVPIAEV REIVSKEGIG ALWKGVGPAM VRAAALTASQ
201: LATYDEAKRI LVKRTSLEEG FHLHLCSSVV AGLVSTLITA PMDMIKTRLM LQQGSESTKT YRNGFHCGYK VVRKEGPLAL YKGGFAIFAR LGPQTMITFI
301: LCEKLRSLAG LHTM

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT4G03115]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.