Factsheet for TraesCS5B01G102500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G096600.1	Wheat	mitochondrion, plastid	95.07	95.38
Os12t0533800-01	Rice	endoplasmic reticulum, extracellular	55.26	72.73
TraesCS5D01G109300.2	Wheat	plastid	63.82	65.32
HORVU5Hr1G026160.2	Barley	mitochondrion, plastid	62.17	62.79
KXG23597	Sorghum	mitochondrion	54.61	55.7
Zm00001d023895_P007	Maize	mitochondrion	53.95	55.03
VIT_07s0104g01160.t01	Wine grape	cytosol	47.04	45.98
GSMUA_Achr1P14700_001	Banana	cytosol	47.7	41.79
Solyc09g074370.2.1	Tomato	cytosol	39.14	41.75
Bra034186.1-P	Field mustard	plastid	42.76	41.4
KRH71523	Soybean	plastid	43.09	41.32
CDY22103	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	42.43	41.08
CDX91241	Canola	cytosol	39.14	41.03
CDY21942	Canola	plastid	41.78	40.32
CDX97299	Canola	extracellular	32.24	39.36
Bra018517.1-P	Field mustard	cytosol	31.58	38.87
AT4G03115.3	Thale cress	cytosol	43.09	37.86
PGSC0003DMT400043390	Potato	cytosol, plastid	45.39	33.09
TraesCS3B01G231700.3	Wheat	plasma membrane	21.38	22.73
TraesCS4B01G139600.1	Wheat	cytosol	22.7	22.7
TraesCS5B01G243600.1	Wheat	cytosol	22.7	21.36
TraesCS5B01G300300.2	Wheat	cytosol	21.05	19.69
TraesCS2B01G335300.1	Wheat	mitochondrion	18.42	18.48
TraesCS3B01G153900.1	Wheat	golgi	18.09	17.97
TraesCS1B01G142400.1	Wheat	cytosol, extracellular, peroxisome	17.43	17.55
TraesCS1B01G206900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	15.79	16.22
CDX91242	Canola	extracellular	0.99	15.79
TraesCS4B01G193900.1	Wheat	plastid	16.78	15.74
TraesCS1B01G206800.1	Wheat	cytosol, mitochondrion, plastid	16.12	15.65
TraesCS3B01G177000.1	Wheat	cytosol	16.45	15.43
TraesCS4B01G307000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	13.16	13.07

Protein Annotations

EnsemblPlants:TraesCS5B01G102500.1	EnsemblPlantsGene:TraesCS5B01G102500	Gene3D:1.50.40.10	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089	PANTHER:PTHR24089:SF664	PFAM:PF00153	PFscan:PS50920	SEG:seg
SUPFAM:SSF103506	MapMan:24.2.13	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:136410543..136412982

Molecular Weight (calculated)

32780.4 Da

IEP (calculated)

10.741

GRAVY (calculated)

0.166

Length

304 amino acids

Sequence
(BLAST)

001: MLTERNLLHL YHRPIAQSNC RPVVIQAIVL PLSPTRTGAG IARRIYTRFP PSRAQILFPS VICLIASSPS FFRPARLGQG DPARRGMASP MSGDARTPPR
101: GAAPYALYQF GTSGAAVAVA TAVTHLLDVI KIRLQMQLAG QRGNLVGMGA IFTQMVEREG PRSLYLGFAP ALTRSLIYGG LRLGLYEPCK HVCSYAFGST
201: NFAFKFASGV VAGALATALT NPMEVLKVRS QMSTSRTSTI GVMREIVSEE GVKALWKGVG PAMVRAGCLT ASQMATYDEA KQVLLMWTPL EEGRAASLER
301: LVHL

Best Arabidopsis Sequence Match ( AT4G03115.1 )
(BLAST)

001: MIGDISPPVT SIPVVEGNEE LRKPQNLIPP FSKVVSHFGI SGISVALATG VTHPLDVVKV RLQMQHVGQR GPLIGMTGIF LQLMKNEGRR SLYLGLTPAL
101: TRSVLYGGLR LGLYEPTKVS FDWAFGSTNV LVKIASGAFA GAFSTALTNP VEVVKVRLQM NPNAVPIAEV REIVSKEGIG ALWKGVGPAM VRAAALTASQ
201: LATYDEAKRI LVKRTSLEEG FHLHLCSSVV AGLVSTLITA PMDMIKTRLM LQQGSESTKT YRNGFHCGYK VVRKEGPLAL YKGGFAIFAR LGPQTMITFI
301: LCEKLRSLAG LHTM

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT4G03115]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.