Factsheet for Bra034186.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
plastid 5
mitochondrion 1
peroxisome 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22103	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	99.04	99.04
AT4G03115.3	Thale cress	cytosol	89.81	81.5
Bra018517.1-P	Field mustard	cytosol	59.55	75.71
VIT_07s0104g01160.t01	Wine grape	cytosol	66.88	67.52
KRH71523	Soybean	plastid	68.15	67.51
TraesCS5D01G109300.2	Wheat	plastid	61.47	64.98
Solyc09g074370.2.1	Tomato	cytosol	57.64	63.51
HORVU5Hr1G026160.2	Barley	mitochondrion, plastid	59.87	62.46
KXG23597	Sorghum	mitochondrion	59.24	62.42
Zm00001d023895_P007	Maize	mitochondrion	58.28	61.41
GSMUA_Achr1P14700_001	Banana	cytosol	63.06	57.06
Os12t0533800-01	Rice	endoplasmic reticulum, extracellular	40.76	55.41
PGSC0003DMT400043390	Potato	cytosol, plastid	67.83	51.08
TraesCS5A01G096600.1	Wheat	mitochondrion, plastid	41.72	43.23
TraesCS5B01G102500.1	Wheat	mitochondrion	41.4	42.76
Bra020342.1-P	Field mustard	plasma membrane	29.62	30.79
Bra003170.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.62	30.59
Bra013815.1-P	Field mustard	cytosol, plasma membrane, plastid	30.25	30.16
Bra014840.1-P	Field mustard	cytosol, peroxisome, plastid	28.98	29.84
Bra007046.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	28.98	29.84
Bra038517.1-P	Field mustard	cytosol	29.62	29.52
Bra030231.1-P	Field mustard	cytosol	29.62	29.34
Bra006022.1-P	Field mustard	plasma membrane	31.21	29.25
Bra026855.1-P	Field mustard	mitochondrion	28.66	29.22
Bra006516.1-P	Field mustard	cytosol	25.48	26.76
Bra020060.1-P	Field mustard	cytosol	25.16	26.42
Bra002259.1-P	Field mustard	cytosol	20.7	25.1
Bra002603.1-P	Field mustard	cytosol	25.48	24.54
Bra024994.1-P	Field mustard	cytosol, mitochondrion, plastid	22.61	23.67
Bra017524.1-P	Field mustard	cytosol, mitochondrion, plastid	22.61	23.67
Bra022065.1-P	Field mustard	cytosol, mitochondrion, plastid	22.29	23.49
Bra035205.1-P	Field mustard	cytosol, mitochondrion, plastid	23.25	23.4
Bra005690.1-P	Field mustard	cytosol	24.84	19.35
Bra021881.1-P	Field mustard	cytosol, peroxisome, plastid	16.56	17.11

Protein Annotations

EnsemblPlants:Bra034186.1	EnsemblPlants:Bra034186.1-P	EnsemblPlantsGene:Bra034186	Gene3D:1.50.40.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF664	PFAM:PF00153	PFscan:PS50920	SEG:seg	SUPFAM:SSF103506	UniParc:UPI0002543BF0
UniProt:M4EZE3	MapMan:24.2.13	:	:	:	:

Description

AT4G03115 (E=8e-153) | binding

Coordinates

chrA01:+:27030613..27032514

Molecular Weight (calculated)

33688.0 Da

IEP (calculated)

10.436

GRAVY (calculated)

0.306

Length

314 amino acids

Sequence
(BLAST)

001: MIGDISPPVA SIPVVEGNAQ AMNSKKLLPP LSTVASHFGT SGLSVALATG VTHPLDVLKV RLQMQHVGQR GPLIGMTGIF LQLMKQEGPR SLYLGLTPAL
101: TRSVLYGGLR LGLYEPTKVC FDWAFESTNV LVKIASGAFA GAVATALTNP VEVVKVRLQM NPNAVPIAEV REIVSKEGIG ALWKGVGPAM VRAAALTASQ
201: LATYDETKRI LVKRTSLEEG FHLHLCSSVV AGVVSTLITA PIDMIKTRLM LQQNSGSVRI YRNGFHCGYK VIRKEGPLAL YKGGFAIFAR LGPQTMITFI
301: LCEKLRSLAG LHKM

Best Arabidopsis Sequence Match ( AT4G03115.1 )
(BLAST)

001: MIGDISPPVT SIPVVEGNEE LRKPQNLIPP FSKVVSHFGI SGISVALATG VTHPLDVVKV RLQMQHVGQR GPLIGMTGIF LQLMKNEGRR SLYLGLTPAL
101: TRSVLYGGLR LGLYEPTKVS FDWAFGSTNV LVKIASGAFA GAFSTALTNP VEVVKVRLQM NPNAVPIAEV REIVSKEGIG ALWKGVGPAM VRAAALTASQ
201: LATYDEAKRI LVKRTSLEEG FHLHLCSSVV AGLVSTLITA PMDMIKTRLM LQQGSESTKT YRNGFHCGYK VVRKEGPLAL YKGGFAIFAR LGPQTMITFI
301: LCEKLRSLAG LHTM

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT4G03115]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.