CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023895_P007	Maize	mitochondrion	92.95	92.95
TraesCS5D01G109300.2	Wheat	plastid	83.89	84.18
HORVU5Hr1G026160.2	Barley	mitochondrion, plastid	83.22	82.39
Os12t0533800-01	Rice	endoplasmic reticulum, extracellular	58.05	74.89
VIT_07s0104g01160.t01	Wine grape	cytosol	69.46	66.56
Solyc09g074370.2.1	Tomato	cytosol	60.74	63.51
GSMUA_Achr1P14700_001	Banana	cytosol	72.48	62.25
KRH71523	Soybean	plastid	64.09	60.25
CDY22103	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	62.75	59.55
Bra034186.1-P	Field mustard	plastid	62.42	59.24
CDY21942	Canola	plastid	61.41	58.1
CDX91242	Canola	extracellular	3.69	57.89
TraesCS5B01G102500.1	Wheat	mitochondrion	55.7	54.61
TraesCS5A01G096600.1	Wheat	mitochondrion, plastid	55.37	54.46
AT4G03115.3	Thale cress	cytosol	62.42	53.76
Bra018517.1-P	Field mustard	cytosol	43.29	52.23
CDX97299	Canola	extracellular	43.62	52.21
CDX91241	Canola	cytosol	50.67	52.07
PGSC0003DMT400043390	Potato	cytosol, plastid	67.45	48.2
KXG25746	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	28.86	29.15
EES15143	Sorghum	cytosol	31.88	28.88
KXG26414	Sorghum	plastid	27.85	27.67
EER91889	Sorghum	cytosol	24.16	24.32
OQU84127	Sorghum	golgi, plasma membrane, plastid	29.53	23.1
EES17872	Sorghum	cytosol, extracellular, peroxisome, plastid	23.83	23.05
EER95032	Sorghum	plastid	25.17	22.52
KXG38173	Sorghum	cytosol, extracellular, mitochondrion	20.81	20.26
KXG31527	Sorghum	cytosol, nucleus, peroxisome	23.83	20.06

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	UniProt:A0A1B6PD82	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KXG23597	ProteinID:KXG23597
ProteinID:KXG23597.1	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	ProteinID:OQU79226.1	PFAM:PF00153	PFscan:PS50920
PANTHER:PTHR24089	PANTHER:PTHR24089:SF664	EnsemblPlantsGene:SORBI_3008G115900	SUPFAM:SSF103506	TMHMM:TMhelix	UniParc:UPI00081ADC61
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:52576388..52579296

Molecular Weight (calculated)

32172.5 Da

IEP (calculated)

10.193

GRAVY (calculated)

0.112

Length

298 amino acids

Sequence
(BLAST)

001: MQPRYGDARQ QVRGRYGLYH FGTSGAAVAA ATAFTHPLDV IKVRLQMQLA GQRGNLVGMG TIFTQMVEAE GTRSLYLGLA PALTRSVVYG GLRLGLYEPC
101: KHVCSYAFGS TNFAFKFASG VIAGGLATAL TNPMEVLKVR LQMSKSSTST IGEMRKVLAH EGFKALWKGV GPAMARAGCL TASQMATYDE AKQALMKWTP
201: LEEGFQLHLI SSCIAGTAGT LVTAPVDMIK TRLMLQRESK GTRVYRNGFH CAYQVVVTEG VKSLYKGGFA TFARLGPQTT ITFVVCEKLR ELAGMTAI

Best Arabidopsis Sequence Match ( AT4G03115.1 )
(BLAST)

001: MIGDISPPVT SIPVVEGNEE LRKPQNLIPP FSKVVSHFGI SGISVALATG VTHPLDVVKV RLQMQHVGQR GPLIGMTGIF LQLMKNEGRR SLYLGLTPAL
101: TRSVLYGGLR LGLYEPTKVS FDWAFGSTNV LVKIASGAFA GAFSTALTNP VEVVKVRLQM NPNAVPIAEV REIVSKEGIG ALWKGVGPAM VRAAALTASQ
201: LATYDEAKRI LVKRTSLEEG FHLHLCSSVV AGLVSTLITA PMDMIKTRLM LQQGSESTKT YRNGFHCGYK VVRKEGPLAL YKGGFAIFAR LGPQTMITFI
301: LCEKLRSLAG LHTM

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT4G03115]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.