Factsheet for PGSC0003DMT400043390

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g074370.2.1	Tomato	cytosol	65.71	96.14
VIT_07s0104g01160.t01	Wine grape	cytosol	51.56	69.13
CDX91242	Canola	extracellular	3.12	68.42
Bra034186.1-P	Field mustard	plastid	51.08	67.83
CDY22103	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	50.84	67.52
KRH71523	Soybean	plastid	51.32	67.51
KXG23597	Sorghum	mitochondrion	48.2	67.45
TraesCS5D01G109300.2	Wheat	plastid	47.96	67.34
Zm00001d023895_P007	Maize	mitochondrion	46.76	65.44
CDY21942	Canola	plastid	49.4	65.4
HORVU5Hr1G026160.2	Barley	mitochondrion, plastid	47.0	65.12
AT4G03115.3	Thale cress	cytosol	50.84	61.27
CDX91241	Canola	cytosol	42.21	60.69
GSMUA_Achr1P14700_001	Banana	cytosol	50.36	60.52
Os12t0533800-01	Rice	endoplasmic reticulum, extracellular	32.85	59.31
CDX97299	Canola	extracellular	33.81	56.63
Bra018517.1-P	Field mustard	cytosol	33.33	56.28
TraesCS5A01G096600.1	Wheat	mitochondrion, plastid	33.09	45.54
TraesCS5B01G102500.1	Wheat	mitochondrion	33.09	45.39
PGSC0003DMT400037834	Potato	cytosol	23.26	30.6
PGSC0003DMT400041633	Potato	cytosol	23.02	29.63
PGSC0003DMT400052443	Potato	vacuole	22.78	29.05
PGSC0003DMT400047378	Potato	cytosol	19.9	28.72
PGSC0003DMT400081953	Potato	cytosol, peroxisome, plastid	19.9	27.95
PGSC0003DMT400005377	Potato	cytosol	17.75	25.26
PGSC0003DMT400014293	Potato	cytosol, mitochondrion, plastid	17.75	25.0
PGSC0003DMT400021041	Potato	cytosol, mitochondrion, plastid	16.31	22.9
PGSC0003DMT400042642	Potato	cytosol	17.03	22.54
PGSC0003DMT400028643	Potato	cytosol, mitochondrion, nucleus	17.75	21.39
PGSC0003DMT400058719	Potato	cytosol, mitochondrion, nucleus	14.63	20.0
PGSC0003DMT400019719	Potato	cytosol	4.08	19.77
PGSC0003DMT400076450	Potato	cytosol, endoplasmic reticulum, mitochondrion	14.15	18.04

Protein Annotations

EnsemblPlants:PGSC0003DMT400043390	EnsemblPlantsGene:PGSC0003DMG400016843	EntrezGene:102593341	Gene3D:1.50.40.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF664	PFAM:PF00153	PFscan:PS50920	PGSC:PGSC0003DMG400016843	SUPFAM:SSF103506	UniParc:UPI000296F85A
UniProt:M1BEJ3	MapMan:24.2.13	:	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400016843]

Coordinates

chr9:-:51635519..51639799

Molecular Weight (calculated)

44684.1 Da

IEP (calculated)

10.233

GRAVY (calculated)

0.145

Length

417 amino acids

Sequence
(BLAST)

001: MAGDSTPATG KTLPSGSMEV KERRKWGVSA SDVVSHFGTS GMSVAAATAV THPLDVLKVR LQMQLVGQRG PLVGMGKLSL QVVESEGLRS LYLGLAPSLM
101: RSVLYGGLRL GLYEPSKYLC ELAFESTNIL VKIASGAFSG AVATALTNPV EVLKVRMQMN TRSSLGPIHE MRRIASEEGV RALWKGVGPA MARAATLTAS
201: HLRSVLYGGL RLGLYEPSKY LCELAFESTN ILVKIASGAF SGAVATALTN PVEVLKVRMQ MNTRSSLGPI HEMRRIASEE GVRALWKGVG PAMARAATLT
301: ASQLATYDES KQALIKYTPL EEGFHLHLIS STIAGSVSTV MTAPMDMVKT RLMLQRESNC AGLYRNGLHC AYQVLRTEGP SGLYKGGFAI FARLAPQTMI
401: TFVLCEKLRG MAGLKAI

Best Arabidopsis Sequence Match ( AT4G03115.3 )
(BLAST)

001: MIGDISPPVT SIPGSSDLFA LCICLNFNPK IIESFDLLSH KLKHEVVEGN EELRKPQNLI PPFSKVVSHF GISGISVALA TGVTHPLDVV KVRLQMQHVG
101: QRGPLIGMTG IFLQLMKNEG RRSLYLGLTP ALTRSVLYGG LRLGLYEPTK VSFDWAFGST NVLVKIASGA FAGAFSTALT NPVEVVKVRL QMNPNAVPIA
201: EVREIVSKEG IGALWKGVGP AMVRAAALTA SQLATYDEAK RILVKRTSLE EGFHLHLCSS VVAGLVSTLI TAPMDMIKTR LMLQQGSEST KTYRNGFHCG
301: YKVVRKEGPL ALYKGGFAIF ARLGPQTMIT FILCEKLRSL AGLHTM

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT4G03115]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.