Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g009090.2.1 | Tomato | extracellular | 97.05 | 97.05 |
| VIT_10s0003g00060.t01 | Wine grape | cytosol, endoplasmic reticulum, mitochondrion | 76.07 | 76.57 |
| PGSC0003DMT400076450 | Potato | cytosol, endoplasmic reticulum, mitochondrion | 81.64 | 76.15 |
| KRH50090 | Soybean | cytosol | 71.15 | 71.15 |
| KRH20413 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 63.61 | 70.55 |
| CDY57210 | Canola | cytosol, peroxisome, plastid | 69.51 | 69.74 |
| Bra021881.1-P | Field mustard | cytosol, peroxisome, plastid | 69.18 | 69.41 |
| CDY37683 | Canola | cytosol, peroxisome, plastid | 69.18 | 69.41 |
| AT2G33820.3 | Thale cress | cytosol, mitochondrion, plastid | 69.18 | 66.14 |
| KRH65469 | Soybean | extracellular | 27.21 | 65.87 |
| GSMUA_Achr4P33320_001 | Banana | cytosol, mitochondrion, nucleus | 65.57 | 65.36 |
| KRH62946 | Soybean | extracellular | 22.62 | 63.89 |
| Zm00001d032430_P002 | Maize | mitochondrion | 60.98 | 60.78 |
| TraesCS4B01G307000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 60.98 | 60.78 |
| KXG38173 | Sorghum | cytosol, extracellular, mitochondrion | 60.98 | 60.78 |
| TraesCS4A01G407600.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 60.66 | 60.46 |
| HORVU4Hr1G078670.2 | Barley | cytosol, mitochondrion, plasma membrane | 60.33 | 60.13 |
| TraesCS4D01G305200.1 | Wheat | cytosol | 60.0 | 59.8 |
| Os11t0423800-01 | Rice | nucleus | 27.87 | 59.44 |
| PGSC0003DMT400005377 | Potato | cytosol | 33.77 | 35.15 |
| PGSC0003DMT400019719 | Potato | cytosol | 9.84 | 34.88 |
| PGSC0003DMT400021041 | Potato | cytosol, mitochondrion, plastid | 31.8 | 32.66 |
| PGSC0003DMT400042642 | Potato | cytosol | 29.18 | 28.25 |
| PGSC0003DMT400014293 | Potato | cytosol, mitochondrion, plastid | 26.89 | 27.7 |
| PGSC0003DMT400047378 | Potato | cytosol | 19.34 | 20.42 |
| PGSC0003DMT400028643 | Potato | cytosol, mitochondrion, nucleus | 22.95 | 20.23 |
| PGSC0003DMT400037834 | Potato | cytosol | 20.0 | 19.24 |
| PGSC0003DMT400052443 | Potato | vacuole | 20.33 | 18.96 |
| PGSC0003DMT400041633 | Potato | cytosol | 20.0 | 18.83 |
| PGSC0003DMT400081953 | Potato | cytosol, peroxisome, plastid | 15.74 | 16.16 |
| PGSC0003DMT400043390 | Potato | cytosol, plastid | 20.0 | 14.63 |
Protein Annotations
| Gene3D:1.50.40.10 | EntrezGene:102582143 | MapMan:24.2.13 | MapMan:4.1.1.3 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR018108 | InterPro:IPR023395 | UniProt:M1C367 | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf |
| PFAM:PF00153 | EnsemblPlantsGene:PGSC0003DMG400022810 | PGSC:PGSC0003DMG400022810 | EnsemblPlants:PGSC0003DMT400058719 | PFscan:PS50920 | PANTHER:PTHR24089 |
| PANTHER:PTHR24089:SF388 | SUPFAM:SSF103506 | TMHMM:TMhelix | UniParc:UPI00029482EF | RefSeq:XP_006361030.1 | SEG:seg |
Description
Mitochondrial amino acid carrier [Source:PGSC_GENE;Acc:PGSC0003DMG400022810]
Coordinates
chr10:-:4670797..4677604
Molecular Weight (calculated)
32663.0 Da
IEP (calculated)
9.978
GRAVY (calculated)
0.111
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGNSGYKEY VAGLMAGIAI VITGHPFDTV KVKLQKHNTE ARGIKYKNGL HCAARILKTE GVKGLYRGAT SSFIGMAFES SLVFGIYSQT KLLLQGGPDG
101: GKPQPQAIVP SAAFGGAIIS FILCPSELVK CRMQVQGPDS VVPISSRYGG PLECALKTVK CEGITGIFRG GFTTLLRESF GNAVFFSTYE YVRYHLHLQR
201: KGASPDSSQL IDIGVGIMSG GLGGIACWSA VLPLDVAKTI IQTTPEKNHT RNPFRILKSI YARSGLRGCY MGLGPTIVRA FPANAAAIVT WELSAKLLGI
301: KRDLN
101: GKPQPQAIVP SAAFGGAIIS FILCPSELVK CRMQVQGPDS VVPISSRYGG PLECALKTVK CEGITGIFRG GFTTLLRESF GNAVFFSTYE YVRYHLHLQR
201: KGASPDSSQL IDIGVGIMSG GLGGIACWSA VLPLDVAKTI IQTTPEKNHT RNPFRILKSI YARSGLRGCY MGLGPTIVRA FPANAAAIVT WELSAKLLGI
301: KRDLN
001: MGESKTTTGE GFGFYKEYVA GMMAGLATVA VGHPFDTVKV KLQKHNTDVQ GLRYKNGLHC ASRILQTEGV KGLYRGATSS FMGMAFESSL MFGIYSQAKL
101: FLRGTLPDDG PRPEIIVPSA MFGGAIISFV LCPTELVKCR MQIQGTDSLV PNFRRYNSPL DCAVQTVKND GVTGIFRGGS ATLLRECTGN AVFFTVYEYL
201: RYHIHSRLED SKLKDGYLVD MGIGVLTGGL GGIACWSAVL PFDVAKTIIQ TSSEKATERN PFKVLSSIHK RAGLKGCYAG LGPTIVRAFP ANAAAIVAWE
301: FSMKMLGIKR D
101: FLRGTLPDDG PRPEIIVPSA MFGGAIISFV LCPTELVKCR MQIQGTDSLV PNFRRYNSPL DCAVQTVKND GVTGIFRGGS ATLLRECTGN AVFFTVYEYL
201: RYHIHSRLED SKLKDGYLVD MGIGVLTGGL GGIACWSAVL PFDVAKTIIQ TSSEKATERN PFKVLSSIHK RAGLKGCYAG LGPTIVRAFP ANAAAIVAWE
301: FSMKMLGIKR D
Arabidopsis Description
ATMBAC1Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT2G33820]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.